LOCUS BG065306 630 bp mRNA linear EST 26-JAN-2001 DEFINITION H3029F01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3029F01 3', mRNA sequence. ACCESSION BG065306 VERSION BG065306.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 630) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3029F01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3029 row: F column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..630 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3029F01-3" /db_xref="taxon:10090" /clone="H3029F01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 150 c 126 g 170 t ORIGIN 1 gaacacctgg tttattgggg aaattggaaa tgaaaacttc aactgtcttt gcagcacctt 61 acaaaatagt gttctgatag ttaaaacaag ctcgtttcca ttaggtaagt ataaatggta 121 agaaaaaggt aatagtagcc cttccggtat gtattcagag acacgcattc ccaaatttcc 181 cacttgcatg tactaaacag atattttaag tctgcttacc aaggaagacc aggtttttaa 241 ttacatttag gtttctgttt cagttaaaat ctattctagc tgtctgtgag cagagctcag 301 ttaagggaag aagcactgag aagaaacact gctatgcctt cccctaggat gtctgcatgg 361 cactgctgtg acaggggtga cccccctggg ccttcctacc tgacctcttc acatccacca 421 gttgggaggg attaggccta gtccatcctc ccatccggtc tacgctggtt ctaagcatac 481 acacacaata ctacagatgt gctaacacgg cttctgccca aaccctaccc ctctacacta 541 cgggaaaaga ggaaaattct tagcatttca gtaatgacag cggcttaacc tcagccacgt 601 tagaacactt ttctacgcat cagagaaagt //