LOCUS BG065292 622 bp mRNA linear EST 12-MAY-2010 DEFINITION H3029D09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3029D09 3', mRNA sequence. ACCESSION BG065292 VERSION BG065292.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 622) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065292.1. Other_ESTs: H3029D09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3029 row: D column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..622 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3029D09-3" /db_xref="taxon:10090" /clone="H3029D09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 102 a 179 c 186 g 155 t ORIGIN 1 acagagaata gttttttatt tttggagcag aggctgagct ggccacagtg ggcctggggt 61 tcccactccc tcatgtccaa gaggccggct tggcacttcc agcctcggtg cgaggagagg 121 agtgtttccc caaggagggc tcgagaacag ccggctccag cggcttccac agtgggcctt 181 ctgtaggatc cacaggagtc aagacctggg gccaggtcca agtgcaggct cccttcccgt 241 cacagccttc gagccttccg gggtcggcag ccattgtgtg ggaccggggt gttgtctgtg 301 attgagatca cttccagacc ccccatggtc agtcctttga tggcagacca gcgtcctggc 361 cccatgcctt tcactacgac tctgatgtgg gtcactccct ttcctgtggc ttttgctgcg 421 gcactatgcc tgctgtctgt gcggcgatgc cgtgcccttc ttggcattgc gaaaccttct 481 gtgccacagg aggcgcgggc cagggacgca ttggtggcag agactacctg gatctgtgtg 541 ttgttgtagg ttgctttaat gtgtgcaatt gggacgtcct caaacttcat ccctgcccac 601 tgcagagagc tctcctgtcc tg //