LOCUS BG065249 754 bp mRNA linear EST 12-MAY-2010 DEFINITION H3028H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3028H10 3', mRNA sequence. ACCESSION BG065249 VERSION BG065249.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 754) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065249.1. Other_ESTs: H3028H10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3028 row: H column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..754 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3028H10-3" /db_xref="taxon:10090" /clone="H3028H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 225 a 166 c 144 g 219 t ORIGIN 1 ccattgattt aaaaagtatt taatataaag aacatccaag ccccagaatg ctcatgatat 61 acagcatatg atactactca aatttccctt tgcctgaaca agaactattt gaacagaaaa 121 tgctaacctt cattatagtc accttcctca aacaaaccct cgggtcaccc aaatggagat 181 cacaaggaac cgtgtgaaac tcaaccatgt ttgtaaaaac aaatagccaa tgcaaagttt 241 tttgatttga aaatagcacc actagaaaag aaggatatgt cgttcaattt aaaattcctg 301 agcaggactt cgattgattt ttattgttat tacttatgta acagacaagg ctagcctcaa 361 acttactgtt agcccaggct ggccttgaac ccctgatcct cctgcctgca cttcccaaat 421 actgggatga caggtgtttg ttgagacatc tgactgtgtg gttgactttg ttactgcaat 481 cgagactgga aaattaaatg agaaattttt ttaactacaa cttttaagta actaaaagac 541 tgctggtgga tcacagatgt gcacatgggc cagccagtgt gtttcctgtc ttccgccatt 601 tctgtcacca atcagggacc tcaaccacaa agggtgtttt cacatctatc ttgccactgt 661 tgacgatggt gcagtcggtg ggtgggcggt catggccatc tgttgcttga agttcaatgg 721 aatgtaccac agtcatccca tctaggactt ttcc //