LOCUS BG065213 834 bp mRNA linear EST 12-MAY-2010 DEFINITION H3028E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3028E09 3', mRNA sequence. ACCESSION BG065213 VERSION BG065213.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 834) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065213.1. Other_ESTs: H3028E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3028 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..834 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3028E09-3" /db_xref="taxon:10090" /clone="H3028E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 281 a 182 c 171 g 200 t ORIGIN 1 aacgctttat taatgtttat ttctaataac aagaaacaga acatcagtcc cttatttgta 61 caaaaatacc tgaaagttta caattaggtt cacgagccaa agagctatat agcacaaggt 121 gaagcaaagc acgcgggata aaggttttgt ctattagtta acaccctctg cattccctga 181 aaacggttac atgtcaggtc attttaccgg tcactgcagt ttgcactatg acatcacaaa 241 tctacgatga gctagaagcg ccctcggagg cacagcgatc gaacaggctg tcaggtattt 301 aagtgcagaa aggggaagac aaaacatcta agctgaggca catatttctt caaagtttaa 361 gcaaacaata aaagaaaaaa gaaaacacgt ttggaaactc ttaacaccta ataatagaac 421 agagtctacc tattaaaacc ctaaaaaccc aaagcatttg gcagtttcct tctcaactta 481 gtccaggtgg ttacacggag tcgtcattta gaaaagaaaa tcacaggcag agattacaaa 541 gtcaaacagg ctccaaaaca accctgagct gtccccttta cattcatgtc aattaaatac 601 aaaaataaaa gtcaattgtc cttcagtctc tgattagggg ggctgggaac cgctaaccta 661 gggaccagct gtttcaggtg gaattcccag ctgcctgtgc aaagggctgg cgatctcggg 721 gccactgaag tctgctacac tcaaggtggg tgggttgcag ccttcaacaa ttcacttcgg 781 caagggaagt acaagttcta cgtcaaacca gctacgtacg aaattgtgac caga //