LOCUS BG064924 693 bp mRNA linear EST 26-JAN-2001 DEFINITION H3025D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3025D05 3', mRNA sequence. ACCESSION BG064924 VERSION BG064924.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 693) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3025 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..693 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3025D05-3" /db_xref="taxon:10090" /clone="H3025D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 166 a 172 c 172 g 183 t ORIGIN 1 actcaaccaa cactttatta caacctttca taggaatgaa ctcatttatt gcaggccagg 61 gctgctcaaa cagtagcact tctactggtc tttaatttcc ttcagtctcc tgatggccgg 121 tttgactgtg acagcagaag tgatgttgta aatctaggac ccaccagcca ctgttgtcgt 181 gaaggaacca cagtgccaga tgacagtgtc ccccattatt atcttggtct tgccacagag 241 gatcctgatg tgctggttga tttcaatttt tgtcaccatt ttctggagag aggcaccaca 301 atgatccagg ccttcttggt acttttagcc aggtcagtga tccacctagg cctgatcttg 361 gagagctgtt gcattgctgg ctgctttggc aggtgatgtg gactgtcctg tctgcacttg 421 cggggctcgt ccatccatcc gcaccacaca tcgtagccat gctattctaa actgatgata 481 aatccagctc cagggcggac agggcgcaaa gccgggatct cgcacagatc tcaggatcca 541 agacgcgggg ccagatctcc cttgtggagg aaccatggcg tttcttccga ggtgactgtt 601 agataaagca gcgtcttcat gttcttcgtc cgagaaagaa gcattggtcc agaaatcaac 661 aggatagggg ctaagataaa agggaagcgc ctt //