LOCUS BG064912 684 bp mRNA linear EST 12-MAY-2010 DEFINITION H3025C03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3025C03 3', mRNA sequence. ACCESSION BG064912 VERSION BG064912.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 684) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064912.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3025 row: C column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..684 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3025C03-3" /db_xref="taxon:10090" /clone="H3025C03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 223 a 143 c 140 g 178 t ORIGIN 1 gagaaagtag taaagatttt tatttgtcaa tacaagataa cacaaataaa ttaattttta 61 caacaatctt agactccagg gcttctctct gaggttagct cattatgtaa atagcctact 121 tactatctaa agtgatcgag caatcatatg ttgagtgttc gagaccaaca ggctgtgaac 181 aatgaggaga cacaaaaggg cacttccttg cctcctttcc tcggtaagat gtgttactga 241 acaaatgagg ctaacttggt ggaaaacggt ctcaatgtta tcagaataca gccaagttca 301 tgtgaacccg aagactatat aatccagcca tacctatcgt cttctttaac aaaaccttaa 361 gctggtgtgg ctgtgcacac cttcaatccc agcattggac ggcagaggca ggcacatcat 421 ctctgggcat ctactgattg agttccagga tagccacagc tacaaagtga gacactgtct 481 caaaacaaaa cacacaacta aaaaagccta ctatccagga agtaggggtg actcccgctc 541 agtggtagag cacttgccta gaatgagcaa gtccctgcct gggcttaatc ttcagtaatg 601 gaattagagt ggggaacatt tgccagtatg aaaccagcat catactgaat tagaagttaa 661 attaatgtca tgttaaaatt cagg //