LOCUS BG064873 711 bp mRNA linear EST 12-MAY-2010 DEFINITION H3024G09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3024G09 3', mRNA sequence. ACCESSION BG064873 VERSION BG064873.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 711) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064873.1. Other_ESTs: H3024G09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3024 row: G column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..711 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3024G09-3" /db_xref="taxon:10090" /clone="H3024G09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 183 a 153 c 169 g 206 t ORIGIN 1 acactgaaaa actccaccca gcaatgtgat ttattgctca agtctacaac agccaacaaa 61 acaaagtgta ccattccccc ctcaacaaag gagctagatt aaagaattac ttcattggat 121 agatcgcagg gttgaggttc tgggacagag gaaatgaaca ttacctgttg cttagaactt 181 tgacatatag ggtgcttctg taccactcct gctttgagtt tagatgttgc ttactgcccc 241 ccccccattt atgttataca ttagatcttt tagtgcccag ttctgtgaca ccatgattga 301 gttgctgttg tttttttagc agtgactgga gacagtgaag agaatgttgt ccatcatggt 361 tgtcatggtt acacatctat cagctgttgg tcatggactc ctctgtgtca tcagaatggg 421 caggtgaagc ctgaagccac agcacactct gttgcatgtg tggagcagct cagcagaatg 481 tggtgctgaa ttccaggttg gcttccagcc taggtttatg aaggaatcca tctttccgcg 541 tttctgatca tcattagatg ggtgctgtgt ccttacacaa ttcgaattat cttcccccga 601 gtgaaggtaa aagcaggaag aaagcaggga cggtgtcagg tagaaaaacc attgctgcat 661 gtgaaggcct aggtaactgt tgcctgtctg gccagccagt ttgtgctgtt a //