LOCUS BG064860 700 bp mRNA linear EST 12-MAY-2010 DEFINITION H3024F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3024F08 3', mRNA sequence. ACCESSION BG064860 VERSION BG064860.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 700) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064860.1. Other_ESTs: H3024F08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3024 row: F column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..700 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3024F08-3" /db_xref="taxon:10090" /clone="H3024F08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 223 a 161 c 135 g 181 t ORIGIN 1 caagtgagta gctgtgtaat aaaatgagca gggctcccat tataagaaca gctctttatt 61 ccatggtttc aaatacatag caaaccaacc acgttccctg aaatttagca atgacattca 121 tcacaagcct caacactcta gtctaaaggg gctcttcaga atccactcca caaagctttg 181 cacaaaagag tttcagcacc agtaaggctg ttttatctct ttaccgttac agtcaaacat 241 gcatgttcaa cctatgcgtc tgaccctgta aaatgaaaac cacactcagc cttgtggtac 301 aaagtttata aacacgatat accaatacaa agttgaagcc attaaaaaga gcttaataac 361 ctaccaggag acatttaaat ctggaaagtt gacggaatct gaagagattt ggaaaggaca 421 cacagacata cattacagta aacattttgc ttggaaagaa gggcgaggga aacttctttg 481 cgccgcagaa agatttccta agtcgctcca agcctacttt ctttctgcta ttatctttaa 541 atactgcaga gcattgtgag cagcgtcact ctgtgcattg ccacaggaga tgcctgagcc 601 gtgacacacg gtgataggac tggtggacag ctctgcgaga cactgatact gtccgttggc 661 actcagctcc tctatatcca aatacgttat gttaaagcct //