LOCUS BG064844 705 bp mRNA linear EST 12-MAY-2010 DEFINITION H3024E02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3024E02 3', mRNA sequence. ACCESSION BG064844 VERSION BG064844.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 705) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064844.1. Other_ESTs: H3024E02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3024 row: E column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..705 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3024E02-3" /db_xref="taxon:10090" /clone="H3024E02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 197 a 159 c 120 g 229 t ORIGIN 1 actgaagtat ttatttatta caggtataga gattatttat tgtatgtata gaatccaaag 61 ttacatgcct tcctgctgtc tcaggtgtta cagggtgaga tcatgccaga gcagaaggac 121 ctgagtccat cctttattgg gaatctattc cctaaggaac actcctgttc ccacagtact 181 gacattaatc aaagtataaa cctctacagt gtaccactaa gaagtcaaga gttttaacat 241 atgaatttta tgggatacat tcaaacccct tataccgacc cttttagtaa ttttccatcc 301 aatgatactt gctttgtccc aacaagtccc attctgtccc ttagttgcac attcccaaac 361 atctttttac ttcttatatt cagaatctaa tctctcaatg caaaatcctt ctgcaatggt 421 cccagtatct aacttaaggg tcctgaataa agtctgcttt accaatctaa caagtgccat 481 caatcacatt tgggtttttt gttttctgag atggggtctc tttagtcctg gctgccctga 541 actctttatg taaaccaggc taaattcaca agaggtccac ctgcctctgc ctcctgagta 601 ctgggatcaa cggcatgaaa tccagctagg agttagtttt taatagcaca tactcacaca 661 tacacagagg ttttgcttgt ctcttaagag agactgtgtg tgtac //