LOCUS BG064727 563 bp mRNA linear EST 12-MAY-2010 DEFINITION H3023B10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3023B10 3', mRNA sequence. ACCESSION BG064727 VERSION BG064727.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 563) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064727.1. Other_ESTs: H3023B10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3023 row: B column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..563 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3023B10-3" /db_xref="taxon:10090" /clone="H3023B10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 103 a 147 c 93 g 220 t ORIGIN 1 gtctgcttct cagatgttta gtcttttctt tagtcttaga gactcttttg tcttcagggg 61 aattcacgtt ctcctctttc actgaaggct tttcagcacc atcagaggaa acaccaggtt 121 tgcaaagcat ctctcggaat tccactccac tcctgacttt ctcaatggaa cctcctgcta 181 tggagcaact ccctccctgc ctgccttcag tgtcaccagt gtcatcagca gatgaccctt 241 cttgtgttgt cttcgccctc tcatgccctc cattatccac tacttttttg ccctgttttt 301 catcttcaga agagtcctct tcttttttct ctggaacact ttttctggca gccccaattc 361 tgctcatggt ttttatctct ctctctaact ctgagtcata gttagaggac tctgagtagt 421 tctggcgttt ctttttagag ataatagagg tttctgttga ttttcctttt ttagtgtcaa 481 aatctgaccc ggaagtagaa tttttccgtt tcctttttcc attatcatct ttccctgttt 541 tacctttatg attcatctgt ggt //