LOCUS BG064712 660 bp mRNA linear EST 12-MAY-2010 DEFINITION H3023A05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3023A05 3', mRNA sequence. ACCESSION BG064712 VERSION BG064712.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 660) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064712.1. Other_ESTs: H3023A05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3023 row: A column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..660 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3023A05-3" /db_xref="taxon:10090" /clone="H3023A05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 165 a 162 c 159 g 174 t ORIGIN 1 ggtttcttgt cttttattat tggcatcagc tggactatat gtggccttaa acatcatgca 61 ctggacagga aagaaagaac gagaaaaagg acacaggagg ggaacagggg tagcggcgag 121 attccgtaat aaaaactgta attcattcaa taggttaagt tttggcatta tgaaatcaaa 181 cacccctccc caccccccaa agttgcaacc caatgagagg gtcacccgtg ggacccagcc 241 aggtgttctg cgttccctca caggctgtga caggcagcgt gtgggtgtaa ttcttgtgaa 301 cggtcttaac ttttcacttt ctttaaataa tctcttttgc ttcttagacg ttccggttca 361 ctggggtgac ataattgcgg ggaaacatgc cggtctgccc gtggcagccc ctttccacca 421 attgggatct gagttatcca tgacatgaat gaagtctcct ctgcgaaacc cagctcgcca 481 tcctcctggg ggtcaaagtc aaagagcgcc tggacgtagg ttggctgctg tggcatctgt 541 tctatgtccc gtaagaatat ctgctggttc ctggacacgg atgttgatct gtggtaatct 601 accagctcat tcaaagaatt aaacttcacc acccacagga aatacttccc ggctccgtcg //