LOCUS BG064581 560 bp mRNA linear EST 17-DEC-2003 DEFINITION H3021E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3021E01 3', mRNA sequence. ACCESSION BG064581 VERSION BG064581.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 560) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT On Jan 26, 2001 this sequence version replaced BG064581.1. Other_ESTs: H3021E01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3021 row: E column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..560 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3021E01-3" /db_xref="taxon:10090" /clone="H3021E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 198 a 112 c 123 g 127 t ORIGIN 1 cttttaaatt ttattatcat ttagcaatgg gaaaatgcaa tttatttaca ccagcagcca 61 tatgggcagg gggaacacaa gagttaatta gctatttgta taggacggat tacttattaa 121 aaaataagaa tctccaaaac aaaggacagg ggtgaatttc aaactaccct cccccaatga 181 tcccagcatg cgataatgcc aggtagtggc ccctgggcat gcgatggtgg gaactaattt 241 actgaagaaa aaagcacaaa ccacagaaaa tgtaaagaac cccttccccc tatacacaca 301 ctcagataca taataggatt actggttggt caatacaatg aacagaagag gaaggatagg 361 attctgctgt tacaggaggg caggggaagg ggagggctcc taaccactgt caactatatg 421 ctggagaaca tttgctccca aaaaagtagt ttgttccctc agggcaataa tagctggact 481 gaacccacct tttatctaca cagagtgggg agctacagcc ctaatgaaaa tgttggagac 541 agaaaacaaa agcagtaaca //