LOCUS BG064506 721 bp mRNA linear EST 12-MAY-2010 DEFINITION H3020E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3020E07 3', mRNA sequence. ACCESSION BG064506 VERSION BG064506.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 721) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064506.1. Other_ESTs: H3020E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3020 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..721 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3020E07-3" /db_xref="taxon:10090" /clone="H3020E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 172 a 183 c 163 g 203 t ORIGIN 1 cgctttatta tctcagctgt ttgtttttta tgacttattt ccttacttat tttgtgtatc 61 aggcggttac cttgtatgtg gaggccagag gacacttgct tggggtctat tctctctttc 121 tattgtgtgg gttctgggaa tcaaacttag gtccttaggc ttgccagcag gcacctttat 181 ctgatgagtt aacctgttgg cccaggtatt tgttacggta aaggccaact gactaataac 241 atcttctctg gaatacagga ggggatcact gtacagcttt agaaatcaag aaacatgtac 301 ttccaacact cagaaggatc tctgtgggtt cgagactagg ttggtctaca cagagagttc 361 taagacagcc agggttacat aaggagactc tgactcaaaa caaccaacca aacaatatgt 421 tactggggtg ggatgcagct tggtggtgga acacttccta gaaaatctga ggccctaggt 481 tccatctcca gcatgacaag acagacaacc acaaagcccc tctggtagct ctctgtagac 541 tcgacattat tcctctcctc tgcccacaca gcccttacct agagtccacc cccatcctgg 601 aaaggctctc gtccaaggtg cctgcctatc tttctcatct acagggtgga gtgagggctc 661 ctcatccgag ctacttatgc atcctgtcac gggcatctgc caggccactg tggcacgctc 721 c //