LOCUS BG064502 656 bp mRNA linear EST 12-MAY-2010 DEFINITION H3020E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3020E03 3', mRNA sequence. ACCESSION BG064502 VERSION BG064502.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 656) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064502.1. Other_ESTs: H3020E03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3020 row: E column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..656 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3020E03-3" /db_xref="taxon:10090" /clone="H3020E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 157 a 170 c 133 g 196 t ORIGIN 1 ccacatcttg aaacaggtac ttatgtccca attttaatta atccagtctc ttccataaaa 61 cttctcttaa ttatcctttg agtgtactga agctgccttc ttctccataa tagagtcaaa 121 caacacccag ttaggagttc ttgtccgtgt cgctgggctg cgttggtgac tctgtcttct 181 cctctgggag ttcagcgggc acatgctccg gcacagggtc gctgtcattc cgtgtcatgg 241 tagcaaatag catgtccatc atccccaagg tctctaggag ttctctttgg taatcaattt 301 ctttttctac aagttcttga agtactataa actttttatc aactactgat gactggccaa 361 tcacaggtaa atatatatcg atgatgatct cagctgcatt aatcaaaaca ggggcgaacc 421 tcggctgaga cagattcctt atcaaaaagt taaggacccg ggtaacctcc ttctcgtccc 481 gacctgcaag agcattggca aggacgcctc tccgagtcag ctcctttatg atggaaactg 541 tcacctcagg ggtccttatc acacatttag gctccaggac tctgtcgagg gcctgtgaga 601 cccgaaagct tttcagatcc ttgtcatacc cctctaggtg cttctttgct ggccta //