LOCUS BG064466 774 bp mRNA linear EST 12-MAY-2010 DEFINITION H3020A07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3020A07 3', mRNA sequence. ACCESSION BG064466 VERSION BG064466.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 774) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064466.1. Other_ESTs: H3020A07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3020 row: A column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..774 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3020A07-3" /db_xref="taxon:10090" /clone="H3020A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 188 a 204 c 199 g 183 t ORIGIN 1 agattgtaag aaatgcatgc ctttaaaatt ctgtttactt agcatatgta caggtaaaag 61 agaaatcacc ctcagatccc acccagcaga aaacatgcac aaacccaagg tatctgtgaa 121 agggaggccc cagccccaag ttagcagtgg ggatggtgca atcctgtgag tcacaagcca 181 ttgcgagagg gctggactaa agtttcaaca gggccagaac ccctgttgct ggccctaaaa 241 caagcgtgca ccatagccaa aggtctgttt gatgccctca aagtagtacc gctgccagcc 301 ttgccgcgtc cgctcttcct caggagcagg gatgccacgg ccttccatgc acagctctgt 361 ctctccattc ttgtcaatga aggtcaaggt gatggtggca aagtgcccct ctggccatga 421 cttaaacctc cacttcatag caatgtgttc ctcggggacc aggtcagtaa actccccggt 481 gacgttgcca tcgaccatgt gaaacttgcc acctctgtcg gcttccaagg cagcgggggc 541 atgggtaaag gcctggacca gctcctgcgt ggtaaacact ctatagagct cctctgggga 601 ggtcaggaag gtttctttaa gggtgatctt acaagtgggg attttgacac caacaggttt 661 ggcctggctt tttgaaggag cagacttagc cttgcaagtc tcagtcttta gtgctggctg 721 gcccactgga tctactgact ctccattcac tgtgggcaag atcatgccct gagt //