LOCUS BG064383 645 bp mRNA linear EST 12-MAY-2010 DEFINITION H3018H09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3018H09 3', mRNA sequence. ACCESSION BG064383 VERSION BG064383.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 645) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064383.1. Other_ESTs: H3018H09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3018 row: H column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..645 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3018H09-3" /db_xref="taxon:10090" /clone="H3018H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 202 a 150 c 122 g 171 t ORIGIN 1 aagcttcgat ttatttaaag ggctcttcgg tggcacacca gagtcctctg cattaccctc 61 agctcttgca caggtttgat gtgtgaggag gcccagttat ccacagcggt ccacaccagc 121 ctcagacaca cctacacttc tgagctgtga gcagggtgta gagtcctgat ctacaacttt 181 cctttccacc tcaaaagaaa gaattcatca gtctaagtgt cttgttcaaa tcacgatcca 241 gtgcaaacat aatcacaaac tgcatctctg gcacacctgg tgctttcagc tctgcacaaa 301 tccaacatgg tgaccctcat agcacgctag ggcacacaag aatcgagtac aataaatagt 361 cactgcaagt ggccaaaaag aagaaactca ctctgcagtc cttttagctc tctctatggt 421 tgagaaatgt taagaaaagc attagcatcc tctactttta tcattacatt cgctaaagcc 481 accaccttga taaagttact aaagccaaga tgggttacaa agttaggtaa gttaattaaa 541 ttcaactccc caaacaatta tgttttatct atgatgccag gtgagaaatg cttatgaatc 601 taaaaaggta ggagaatggg gaactaagat tttaggcctt aaaat //