LOCUS BG064294 578 bp mRNA linear EST 12-MAY-2010 DEFINITION H3017H09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3017H09 3', mRNA sequence. ACCESSION BG064294 VERSION BG064294.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 578) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064294.1. Other_ESTs: H3017H09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3017 row: H column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..578 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3017H09-3" /db_xref="taxon:10090" /clone="H3017H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 106 c 90 g 162 t ORIGIN 1 gagaggctca tgaattttaa aaggggccac tatctaattt caaccatgct tcacaaaaca 61 ataatggcta ttttatattg cagttaccaa tgtaatgcaa ttagtgcttt aaaacaatct 121 atactcaaac aaaataacac aatagcaaaa gaaagaagag agagagggaa agaaagagag 181 aaaccagcca accaaccaac ctttggagaa aatatgctta tcaaaagctt cttggaaaag 241 aaaatttacc tgaatatcaa gtcatgactg atctcaagtg taatgttaaa agcttcacag 301 acatgaatat tacaatcttc aggtctcagg actttatatc tgagaagttt agagtttggt 361 ttgtttttaa aattcacttt ctaaccaaaa caaataatag aagtactcaa ttttcactat 421 ttacagctca gcctacggtc tgaaatgaca caatacaagt tctcttattt aaactgcagc 481 attaaagggt aggcacacca tttttctgct gctcgattgt catccactga aacacacata 541 gaaaatagtt atgttagtaa aacggtcact cccattac //