LOCUS BG064242 571 bp mRNA linear EST 12-MAY-2010 DEFINITION H3017C07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3017C07 3', mRNA sequence. ACCESSION BG064242 VERSION BG064242.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 571) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064242.1. Other_ESTs: H3017C07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3017 row: C column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..571 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3017C07-3" /db_xref="taxon:10090" /clone="H3017C07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 148 a 154 c 116 g 153 t ORIGIN 1 agtttacatt agtttaatgc cttctgtaca gcaccagagg ttaaaagtgg atctgaccaa 61 ccaaatgttc tttattagtc cgtttgtcat cacacatttc tacagtacat gtacagggga 121 gaggaagaca gctcaggtca aagctttcgc cttaaataaa tacgcacttc atctactcca 181 tactgaacac ccaatcaagc gcctggtctc tgaaggctac ccaagtcgca tgggattctc 241 taggtttgct ttgaaagttt caagaaacct ggtagctagt tcatcatcaa ccactcggct 301 gtcacttgac attgtgaccg ttataagctg gtgctgctgc agttgagggt tcccctcttc 361 atcctccgtc agcttcagca cggggcggaa tctcccaacg gccaagatac aggcctgagg 421 cgggttaatc actgcagcga actcatcgat gccaaacatc cccaagttgg aaatactaaa 481 agatcctcct tggtactcct ctggcatcaa tttcccatcc cgtgctttct tcgacagaac 541 ctttacagag tcagcgatct cctgaatgcc c //