LOCUS BG064212 376 bp mRNA linear EST 26-JAN-2001 DEFINITION H3016H05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3016H05 3', mRNA sequence. ACCESSION BG064212 VERSION BG064212.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 376) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3016H05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3016 row: H column: 05 Seq primer: -21M13 Forward POLYA=No. FEATURES Location/Qualifiers source 1..376 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3016H05-3" /db_xref="taxon:10090" /clone="H3016H05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 77 a 75 c 118 g 106 t ORIGIN 1 aaaacaattt tatataaata gggcctttaa caaatgcgtg cgcagagcgg gcaggtgtga 61 ggatgagaga ttccaccttc tcctctggga agggggttcc cggttgcgtc atcctggtgg 121 ctacgcgggc gggttctcaa ggaggggctg gatgcctctg gtggtggttt tggttttttc 181 caagggagga atcagggggt tcaggccacc tttggctttg gttacaactt cttgggcaca 241 actctgaaga agggtggaaa ggataatggg acctcgggtg gtggtggccc aggacttggg 301 ggtcttcata ccaacacggt ttacaagggg ttttggaaaa caaccttcct ttccggtttc 361 tttcatcttt ttatct //