LOCUS BG064108 743 bp mRNA linear EST 12-MAY-2010 DEFINITION H3015E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3015E11 3', mRNA sequence. ACCESSION BG064108 VERSION BG064108.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 743) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064108.1. Other_ESTs: H3015E11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3015 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..743 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3015E11-3" /db_xref="taxon:10090" /clone="H3015E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 203 a 183 c 182 g 175 t ORIGIN 1 gctttaaagt ctaaatttat taagtaaaac caagtaacat cagagatact acatttggct 61 tagttccaat ggaccaatgt ccatttgcag cagagaagac tccaagtgaa gaaggtgcat 121 tgaggtgtgg gtgaagggac agggacaaaa ccatctccca ataatataaa agcagatgtc 181 accctgccag tgggagtcag tcagcccaga cgaaacccaa tgtttattgc gcatgactaa 241 cactaagtaa gcacaggact gtcagggagg agagagccag aatattccga gaaccaggtg 301 cagcaggctg gctggagggc agtagacagg gcaggtcctc tccatcactc gcggaacact 361 gtgaccacat cgtagccctc aggcggagtg acccgctccc gggcatgctt ttcacagtag 421 atctgatcct ctacaaagaa atggcccttc tgtttcaggt tgatgccaca gtcggtgcac 481 acatagcatt cagggtggcg atggtgatcc ctcagcttca caaacacacc aacaatacca 541 gttccacatt tgtcacagat gggcagcttc tgagcatttc caacagatgc agccactttg 601 gtgactggag ctttaacact tctaaatcct gatggcttgt tgggatcccc tttcccatct 661 gactccagga tctcctgcag aaccaggaag gatgtggact gtttgggggg ctcgtttaat 721 tcttgcttct cctgaagcat ctt //