LOCUS BG064102 809 bp mRNA linear EST 26-JAN-2001 DEFINITION H3015E05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3015E05 3', mRNA sequence. ACCESSION BG064102 VERSION BG064102.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 809) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3015E05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3015 row: E column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..809 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3015E05-3" /db_xref="taxon:10090" /clone="H3015E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 205 c 178 g 213 t ORIGIN 1 ctttctttct ttctttctct taatattttt aaaaaatttt atttattatt attattgatt 61 tatttttgct tttttgagac agggcttctc tgtatagccc tggctgtcct ggaactcact 121 ctgccccaaa ctcagaaatc cgcctgcctc tgcctcccaa gtgccaggat taaaggcgtg 181 tgccaccact gcccggccta ctttttcttt tgagacagga tctgagtaac tctggctggc 241 ctagacctcg atatgtagca tacgtacgaa gaccaggctg gcctccaact cagagatcca 301 cctgcatctg cctccagagt acatggatta aaaatattgg caccatgcct ggccgtccat 361 cattcaagaa atatcaaaat acccttctgt cttactcccc cctccccctt ttctcatctc 421 tgagataatt cccaggagac tgagaacacg gccagttttg ataaccaaca ggacttatta 481 taaaactacc aaacttgaca gaggggcaaa cagactgtac agagaaaaaa agtgtgggcg 541 gacatgtaga ggaactgagg aaagagagcc aagggggagc cgggacctca gaaagccggg 601 agacttcaga cgctgggaga ctctgcctgc tggggctcag ccctgaggta cactacgcta 661 gcaggaaaga cctgccgttt cagctctttc tgtgtgtatt ccctcttctc aacagccagt 721 gtcaggacca agtttgcaga aatctggggt ccagcattct tgttgaagtc acagtgggaa 781 gaagtgactc agtgagacag ataaccaag //