LOCUS BG064072 723 bp mRNA linear EST 12-MAY-2010 DEFINITION H3015B11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3015B11 3', mRNA sequence. ACCESSION BG064072 VERSION BG064072.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 723) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064072.1. Other_ESTs: H3015B11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3015 row: B column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..723 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3015B11-3" /db_xref="taxon:10090" /clone="H3015B11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 228 a 164 c 133 g 198 t ORIGIN 1 attagcaaat agttatttta ttgaaacacg gtcaaaatct agccaggtag ctcttaggac 61 aatctaaaat caaaatttaa tcttataact ttagcaatat atattgaaca cttacattca 121 agtatacaga acacaatcca ttaaatcttg aaaaacactg taaggaaacg tgaacgttcc 181 tctgccaatt ctagcgactg tcaaatcagc tctgtaaaca cattcacaca tcccagcact 241 ggggaggtca gctgctcaca catcacagca ctggggaggt cagctgctct gacatgcctt 301 gctagagttt tgacagtaga ggggaacaat tacaacagta cttaaaaata gatcttcaag 361 acaactcatc cctatgtaca cacattatgc taacctgtca cagacagtaa gtgtcaaatt 421 catacactga agtttgtggc agcatcctac acattgagaa cttactatta aaataaacaa 481 acagctgtca aatgtttctg agatggtctg ctccacctgg gaggatggag tgctgctcta 541 aagcaacgtg ctcactgctg cttctcaaag gcaaagacca agtagatact tgtagcttcc 601 cattctgact tacttaaggt tcccagaggt aacctcactt ggctcttctt caggtactct 661 gctgcatgcg tgtagtcacc caccttttca gaggcaagtt tagagttctc atgtgcaggg 721 tat //