LOCUS BG064054 627 bp mRNA linear EST 12-MAY-2010 DEFINITION H3015A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3015A04 3', mRNA sequence. ACCESSION BG064054 VERSION BG064054.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 627) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064054.1. Other_ESTs: H3015A04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3015 row: A column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..627 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3015A04-3" /db_xref="taxon:10090" /clone="H3015A04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 153 a 171 c 123 g 180 t ORIGIN 1 ggataggatt tcttttacaa aactttcagt gtcaaaaagg aaattaaggc catcagattc 61 gcagcttaaa aattcacata aaggaaatac aaaaatatca tgtgcttctg agaaggctct 121 gcactgtata caggactcca tgcttctagc ttgaggaaga tcgaccatgt cttgacaagt 181 tcacataatg gcacagcttt tattggatgc tcttggggct ccctgctggt ggaaacgctc 241 ctcctccaca gccactccga tgggctcctc ctcctccacc gcctcctcct cgggtatggt 301 ggtcttgaag actgtgcttc tctgagcaac ctcctctccc tgagaattct tcaatataac 361 cttcacatct tcaccagtac cccaagagtt ctggttcttc cagatgaggt cagttggagg 421 gctggctgtg acgccagcat ttgcagccca cactgtgaca gtctggccag ccttcagcac 481 atatcttgag gtatatttgt aactgactga tgtgtctcca atttttctga tcatctccca 541 gcctcccatt ggttgatcct gctcagaagt gttcttcaag cgaataaact tcccatcaac 601 atctatctct tcaatgcaca cgttccc //