LOCUS BG063988 619 bp mRNA linear EST 12-MAY-2010 DEFINITION H3014B12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3014B12 3', mRNA sequence. ACCESSION BG063988 VERSION BG063988.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 619) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063988.1. Other_ESTs: H3014B12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3014 row: B column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..619 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3014B12-3" /db_xref="taxon:10090" /clone="H3014B12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 119 c 132 g 174 t ORIGIN 1 caagttatga agtgtttatt cattatacac accggaaaga agcattgcat acttgtatct 61 cctgttctcc ataacaagct tatgaagaga tggtataaaa tagtcataac ttaaaataca 121 tttggattcg aaatgcagcc aggacaatta gatctcgaca cagctgtgtg tggtggcacc 181 gcctctaatc ccagcactca ggaggcagag gcaggcggat ttctgagttc gaggtcagcc 241 tggtctacag agtgagatcc aggacagcca gggctacaca gagaaacctt gtctcgaaaa 301 acttaaaaga gtttatttga agaaaaaaaa ccttttgcgc tttgtattac ttgaattgag 361 gtctgttgca acctctgagg taaagaagaa aatcaagttt tcttttcttt tcacagtgca 421 gtgaccaatt ctggagtcca tctgttgaaa tgctttatcg cagatataac aggaagtctt 481 aagtaaatgc tcccagagta gatgatgcgt cagagttctt cctgacaact ggagttaaac 541 acctagaaga atgccaatat tgttttaaat attgtgcatc tcaacttgaa ggagattcgg 601 cattaagacc tgcattacc //