LOCUS BG063975 575 bp mRNA linear EST 12-MAY-2010 DEFINITION H3014A09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3014A09 3', mRNA sequence. ACCESSION BG063975 VERSION BG063975.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 575) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063975.1. Other_ESTs: H3014A09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3014 row: A column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..575 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3014A09-3" /db_xref="taxon:10090" /clone="H3014A09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 152 a 132 c 134 g 157 t ORIGIN 1 gtttttaagc ttagtatttg aggttccaaa tcattaggcc acatattaac gctgtataga 61 agcagaccac aactgcttat gatcttccac caggaaagct aaaggagttc tgtaatcatc 121 aagttatgcc cagtccatct ggccgccgtg ggcagggcag ggaagcctct tcgagacccc 181 tcctgagctc agtaagtagt agaaaaataa aaggcacaca cctgacggtt gatttatttg 241 ctgagtattc agagcacggg cccatctgtt ggtgctggtt aaacaggaat ttaggagaag 301 gctgtgacaa cgaagggaat tctgcatcgg cgcctttcta cgtccaagtg gtccacacat 361 tgctgacgaa ctgtatggaa catgacttca ctattagaca caaaagatgg cgtttctaat 421 attgtctgtg accactccat gtcctcaggc ttgctttgtt ttatattagc tgaactgctc 481 cagaagcaac aagaggtgcg atggttttgt atcggatcaa gtgctgtgag cccacctcca 541 agtcaatcac gtagtctctc tgctcatcgg cttct //