LOCUS BG063931 786 bp mRNA linear EST 12-MAY-2010 DEFINITION H3013E05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3013E05 3', mRNA sequence. ACCESSION BG063931 VERSION BG063931.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 786) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063931.1. Other_ESTs: H3013E05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3013 row: E column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..786 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3013E05-3" /db_xref="taxon:10090" /clone="H3013E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 247 a 170 c 163 g 206 t ORIGIN 1 gttggcaaaa gaaaaacatt tattgtcctt tgaaataaaa tatacaaata aaagctgggg 61 acctgggaca gtagagaaga taaaggaaaa ccaagtaacc cattctggag tagggaaatc 121 tacctctgac cccttccccc tgatcaaagg agggaaaggt cttataagcc tgtgatttta 181 gggtccttta attattatta ttattttttt tttctaaaac agtgtcttac tatatagccc 241 tggctcacct gaaactaact gtagaccagg ctggcttgaa ctcaacagat atttgactgt 301 ctctgctgtg ttgggattaa aggcatgtgc caccatacct ggcatcttac ttcatttttg 361 agacaaggtc tcattatgaa gcccaggttg gcatggaccc tccaacatgc tgggattaca 421 gacataattc caaaaagcta gaagttttag atggggaaga aaaatatatc ctatacttga 481 tgcttcttct gggacaaatt ttctgtcaag acacagcaca atactacttc cactggataa 541 cctcaagaaa caaagccctt agaaatcata gagcgtactt tccccagtca cacacacagg 601 aacacaatga aactgatggg gaagagggta catcttgaac acctgggcaa atttatggac 661 ctaccacctg ggtgcgcaca ctctgggtgt cacggtagat cactagacac atcactcagg 721 tgaatgacca gagagaaatg gctgcggtct tcaggtagca gcactgctct gaaccctaac 781 cttagt //