LOCUS BG063778 647 bp mRNA linear EST 12-MAY-2010 DEFINITION H3012F09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3012F09 3', mRNA sequence. ACCESSION BG063778 VERSION BG063778.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 647) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063778.1. Other_ESTs: H3012F09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3012 row: F column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..647 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3012F09-3" /db_xref="taxon:10090" /clone="H3012F09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 169 a 152 c 158 g 168 t ORIGIN 1 gtaataaaga cactgctttt atttagtttg atatgtttct atacagaatg cagaaaacac 61 atcttaaaat catatagaag gaaataaaaa cacgtcagtg gttggtgaac acttgaatgt 121 gagattggct ctctgtctca gagtctgatg gccatcgccg gctcagggag ggggctgcct 181 gcaaaggcat tgttgctgtt gttattctgt tcactgcccc actgcctcca gttgctatga 241 caacaggcca ctttgggcct gcctcctctc tacatggcaa tgcccaatgg tggggttgct 301 aagagcaaca agagttatct ggagggcttc ccaaagccct cacctggaat actgggattt 361 gtttatttgt ttatttattt atttattttt gatgaggtca ccagaaataa tttcatcgga 421 tcagatccct gctcttgact ctgggacatc agggaaactc cagctcggac cagagcttgg 481 gagcacaagg cccagtcacc agccatccat gaagcactca tcggcagact cccgcatggg 541 gagtgctcac tacaaagaac cctcctgggg gctgagcagg aagggtaggc cttgtggaga 601 aagcagaaga accaccattt ggaagcaacc cttctgaact actggcc //