LOCUS BG063727 644 bp mRNA linear EST 12-MAY-2010 DEFINITION H3012A09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3012A09 3', mRNA sequence. ACCESSION BG063727 VERSION BG063727.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 644) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063727.1. Other_ESTs: H3012A09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3012 row: A column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..644 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3012A09-3" /db_xref="taxon:10090" /clone="H3012A09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 249 a 112 c 115 g 168 t ORIGIN 1 aaaagacaat tcactgtaca cattttattt acagttttgt acactgtctt aatatggatg 61 ggaccgcttt tctacttgag ccattgtaac caaagcaaaa taacctaaga atacaaagtg 121 ttaaagtaca gcatagagat acaaaggcag acatactaat tctagttagg aatgtaatta 181 tggtgttgca tttttatagt ccacaattat gtttagggat cacacagaca tagatcactg 241 atttgaatga aatgcataaa tttgtagcaa agctttgtag ttacaaaaaa caaaaaaatt 301 accaaagaat gcacaaattt aatgtttatt ccacctttct gtcatattcc tggatccttc 361 accaatgtta cacgaggaaa aaaacaaaag caaaacaaat gaaaaactga aatcagaatc 421 actaatgtta tcaaggaggg aagcaaataa attaaatcta gcagccatca gcaagaggac 481 agcaaggaca atgctgtgaa aggaaacaga aggttgctag aaagctgtac tcagactctc 541 acaccagcaa agtccgctcc tgcatggagt ggagcaaaac cagatctttc ctgctaaggt 601 aatagaaatg caagttcttt ttcgaatact gtggaaaggc aaat //