LOCUS BG063715 554 bp mRNA linear EST 12-MAY-2010 DEFINITION H3010F11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3010F11 3', mRNA sequence. ACCESSION BG063715 VERSION BG063715.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 554) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063715.1. Other_ESTs: H3010F11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3010 row: F column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..554 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3010F11-3" /db_xref="taxon:10090" /clone="H3010F11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 131 a 150 c 144 g 129 t ORIGIN 1 gaaaaagaga gattgtgtgt ctttacgtaa cagccaaacc ctatcaaaag aaaagcatgt 61 tcacagtagt ccacccaagg gacccaaggg atttccaaac ccttcacagc ctggccctcc 121 ccacccacag tccctgtgag gtagtctggt tcattctcca ttcggttccc gccgagatgg 181 cagagggttg ggcacaggga ccatttagat gcttgcccca cggccctgag ggtgtggtat 241 gacaggcagc agattcgaca gtggggaaca agtggggcct cgggacgcag ccagacaaag 301 tgctttgctg tagggagctg ggctatttct gtctcgccct agttaggggc cccccccctc 361 ccagtggtgt ttcataatcg caggtccttt gacatttttg tgacgcgaca tccttggaac 421 acagccgaaa ataaccttgg ttttcttccc catgctttgg aagccttcag gacgctatag 481 ggtgaggcac tgaaagccta tagctgtaga gatcttgatg tcatcactgc ccacaggtct 541 taacagcagc taca //