LOCUS BG063634 643 bp mRNA linear EST 12-MAY-2010 DEFINITION H3009F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3009F07 3', mRNA sequence. ACCESSION BG063634 VERSION BG063634.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 643) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063634.1. Other_ESTs: H3009F07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3009 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..643 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3009F07-3" /db_xref="taxon:10090" /clone="H3009F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 254 a 105 c 74 g 210 t ORIGIN 1 acatttcaaa aaagattttc ctttatttaa acacatttac agcatgcagg ttaacttaaa 61 attatatgtc attttcccaa accaactatg tttaaatgta accctaaaca ctgaaaataa 121 aacaacatat tccacaggta gacctagact ctcctctgtt acctcaaatc aaactgagaa 181 ttgcaaataa attcagttat gcatagtatt tagtttcctt aaattaggca aataatttaa 241 ttgatcacca tgaataaata ctattcttat ttcattgagt ttctcttctg aaccaattat 301 caatactact cagaggaaca ttaatatatc cagtcacaaa aaaagacact gcaaattaaa 361 atattttcaa tattctaggt gattaaaaat gtccattttg tgtgaatgct atatttaatg 421 gcctatcatt gcaaaaaaga gttcagttca ctgaaaagaa atttgtgaaa ttcttagtat 481 actttatgaa aggttgaaat tataaataga aaagaaacat ttaagattaa aaaaaactaa 541 caatgtgttt tcttaacaac atgctagtta caattcattg tgtgttatac aagcaccgat 601 acccatgata catcttaaaa cttctatact cagacaaagg aga //