LOCUS BG063575 764 bp mRNA linear EST 12-MAY-2010 DEFINITION H3008H12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3008H12 3', mRNA sequence. ACCESSION BG063575 VERSION BG063575.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 764) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063575.1. Other_ESTs: H3008H12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3008 row: H column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..764 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3008H12-3" /db_xref="taxon:10090" /clone="H3008H12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 229 a 176 c 126 g 233 t ORIGIN 1 cattttaagt ggttttaatg aaaaagctat tgtatttcca aaagtacaaa cagcattatg 61 accttacatg cagactcacc aacctgcact ggtgtaagca ggcagctctt agcaggccat 121 catccctttc agccccagtc catggcgctt cctttagagg acaatgacac acacggtaaa 181 cagaaaagct ctaatacaaa taatctgcca taaatatgag acacttcgga atcaaataca 241 caattaaaaa atattatttt gcttcttgac acaatttaaa ggtccaactc tgaaaaatgc 301 agatttttaa actaaatccg cccttttcaa aagatgaaag acagtagtca cagccatgtt 361 ggtttcttca accaaggctg acatctgtac cccaagatct acaacatgat ctttttttgg 421 tatttttatg ttgccaactc cacaacagct cagtttatgt gtacgctcct ttgagaagaa 481 gcaggaaaaa acactgcatt ccagttctaa gtcagtgtta aaatcatcct tttcctgttt 541 tttcgttttt tcttcttctc ttccaagtga ctagtagctt ctgcaaaaaa catcacttca 601 ctccttgctt cacactctct cttgagataa tcgagaccag ccatattgaa gccaatggca 661 tcctggactt gtctgacttt tgaaatagtt gtttccttta gttcctctat cacgggcaca 721 agcatctggt tgctggtgat ctggccaaag tgaatcctga ggag //