LOCUS BG063492 689 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007H05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007H05 3', mRNA sequence. ACCESSION BG063492 VERSION BG063492.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 689) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063492.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3007 row: H column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..689 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007H05-3" /db_xref="taxon:10090" /clone="H3007H05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 191 a 167 c 145 g 186 t ORIGIN 1 gagacagggt ttctctgtat agcctaccca ttctggaact cactttgtag accaggctgg 61 cctcgaactc agaaatccac ctggccggtc agagcataaa gggaccctgt ctcaaacaaa 121 taattcaaac caaaaacaaa ataaagcata aaaccagaac tgataatctt caaagtgaga 181 tgctaagaac ctggaaagtg gtagatcacg acacttccta aactctgttt ctagctcaag 241 gaagttatac aaaaaccatg attttctctt ttcagtgttc atgtgtgtgc ggtttactgt 301 ttactggtgc atgtgcacag tgaaggctag acagcaagta caggtgttgt tcttcaggag 361 ctgcccacgt gtttctatcc atgtgtgttg tacatggatg tatgtgtgtt gtggcacaca 421 catgcagaag ccagaggaca atctatgagt cagttctctc ctacctacca catgtgtcct 481 aggagtcaaa ctcaggccgc caggctccat gatgagcatt accagctgaa ctatctcaca 541 ctccactttg cttttagaga tggcctctca ctggaagctg aaacttgcag ttaactttgt 601 tgggtagcca acaagccact cggatctacc tgtctctagc tctccagatc taggattaca 661 aacacgtggc acttatgcct cagctcttc //