LOCUS BG063415 653 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007A06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007A06 3', mRNA sequence. ACCESSION BG063415 VERSION BG063415.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 653) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063415.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3007 row: A column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..653 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007A06-3" /db_xref="taxon:10090" /clone="H3007A06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 186 a 153 c 115 g 199 t ORIGIN 1 catgctaaaa gcagtttatt tctcatttcc ctcactggct ttgcctaaaa atatattgaa 61 tatagttttc ttaaactaga attttatgac tattttcatc ttttttacat aggacattta 121 cattatttcc aataaacaat gcaatctgct atattcatgg gcaggtacaa aaagtccctg 181 tcaactagct ccttaaagat ggcctctgta agaaaagact gagttctaat gtaggagtca 241 tttaaatccc tattacacaa accctagcca aggaatctag tcacgcacac agaatctcaa 301 ggtcagttaa gctgacggag caccttacag gacgttctgc cctgagacag aagaatgtca 361 gtccctcagt actcaacatt cacaccctaa aaatgtggtg actgctacag tggcgagctc 421 cctgcagtgt cctgagggga ccagtccttt tcttcagtag gttaccacac catcctgtgg 481 tttgctagtt actttcccga atgcttaaat tccaacaaag cgttattttg caaaagttcc 541 tttagtccaa actcactgtc tctgtttgga tctctttgca gcagaactct ctgctcatcc 601 attcttttag cttgagagcg taagatgagg ctaaagaagt cctcatccgg gac //