LOCUS BG063253 582 bp mRNA linear EST 12-MAY-2010 DEFINITION H3004H06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3004H06 3', mRNA sequence. ACCESSION BG063253 VERSION BG063253.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 582) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063253.1. Other_ESTs: H3004H06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3004 row: H column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..582 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3004H06-3" /db_xref="taxon:10090" /clone="H3004H06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 131 a 164 c 154 g 133 t ORIGIN 1 ggcatggtca gctgaggatt tattggcata aacgcaacca tataaaaaca taagttatga 61 aaaacacagt cacgatgtac ccccccatcc cccaagccca tccccccgag cccccttctg 121 caggagggcc agcctggcac ctcctcagcg catccggtag tcggtggaac aagagagctc 181 acacagctga cccttgaagt ccaggtcgat ggtaaagtcc aagtcacgat tgtttttggc 241 attgggcctc attccaatgg tgccaaagat ctcctcgcca gtcttcactg gtaggtagtc 301 ctccatgtag aacacagtct gcttccagtg tgtgtacggg gactcaggac tggtggagaa 361 gccggtcctc ttgtggcatc gggtgaactc gatgttgaag taagccacca gcgcgtgcac 421 gtagtcggtc ctcttcactt gcaggcagaa gggggaggtg aaggtcaggt cctccacctt 481 gactgtgtag atgtccacct cctttatgag gcaggcattg gtgaccagct gctttgggtc 541 caccacgtcc accaggggct ccttgatggc cacgtcttta at //