LOCUS BG063047 706 bp mRNA linear EST 12-MAY-2010 DEFINITION H3001E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3001E01 3', mRNA sequence. ACCESSION BG063047 VERSION BG063047.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 706) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063047.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3001 row: E column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..706 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3001E01-3" /db_xref="taxon:10090" /clone="H3001E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 229 a 125 c 110 g 242 t ORIGIN 1 ggtttttcga gacaaggttt ctctgtgtag ccctggctgt cttggaactc actttgtaga 61 ccaggctggc ctcgaactca gaaatccgcc tgcctctgcc tcccaagtgc tgggattaaa 121 ggtgtgcgcc accacacccg gtcttcctgt cacttttata gatccttaaa atatacttga 181 ttgagcttaa ttatttgaaa aataagtgcc aaaaataggt acacacttag ttctaattta 241 aaaattattc actatggcca acaatatttt tttgagaatt actagtgact tgcaaacagt 301 ttactatttc taactaaaca aattatagtg tatgatttag tataacaggt gaaaaccacc 361 tataggattt cagagcaaaa ttaaccatgt agttttaaat ttatacttca tctgtcctgt 421 tcacaatttt tttctcattt ttcagaggct ataaatttat cagtcaatac aattatttaa 481 catttgaaaa ttatttaatt ctataatgtc ttagtccact tatttcctaa tattaaagat 541 gacattagct ctgctcaatt cttactttag caggaagata taacagaaca aagcagagca 601 cattaagcta tgtttaagtg cagaagtaga aagaaggggt atagtacttc caaatccatt 661 taacatgaga tccatttttg atatgtaaga tatttgtatt caaaag //