LOCUS BG063023 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3001B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3001B09 3', mRNA sequence. ACCESSION BG063023 VERSION BG063023.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063023.1. Other_ESTs: H3001B09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3001 row: B column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3001B09-3" /db_xref="taxon:10090" /clone="H3001B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 178 a 152 c 116 g 232 t ORIGIN 1 gtttttgccc ttgagtcatt tattaggctg ggttttcagg acttttatga aagcgtcttt 61 tggaatctca atgttgccaa tcttcctcag cttctttttc ccttcggact gtctcttcag 121 aagtttcatt ttccgggtaa tatcaccacc ataacatttt gccaaaacat tttttctgta 181 ggctttcact gtttctcttg caataacttt gctcccaaca gcagcttgaa ttgctatctc 241 atacagttgt ctgggaagag actccttcag gcgttcacat atgcttttgc caacagtgta 301 ggctttctct ctatggacca cagttacaag ctcttccacc atatttccat tcagcagaat 361 atccatttta acgagttctg cagtctggta accggcatct tcataatcaa aacttgcata 421 tccagaagag agagacttca aagagtcata aaaatctacc acaatttcat tcaaagggaa 481 gagatattta agcataactc tattttcatc aataaaagtc atatttttct gaattgctct 541 tcgtgcctga caaagcgcca ttatttttcc agtgtactca gtcggtgtaa taacagtgcc 601 caaaacaaca ggttccaaat attctgttac ttgggacttc tcagggaact gtgcagggtt 661 gatgattgtg atctcctt //