LOCUS BC171917 969 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens phospholipid scramblase family, member 5, mRNA (cDNA
clone MGC:198632 IMAGE:9054571), complete cds.
ACCESSION BC171917
VERSION BC171917.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 969)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 969)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 19 Row: G Column: 17.
FEATURES Location/Qualifiers
source 1..969
/db_xref="H-InvDB:HIT000503648"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198632 IMAGE:9054571"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGCCTCCT"
gene 1..969
/gene="PLSCR5"
/db_xref="GeneID:389158"
/db_xref="HGNC:HGNC:19952"
CDS 28..807
/gene="PLSCR5"
/codon_start=1
/product="PLSCR5 protein"
/protein_id="AAI71917.1"
/db_xref="GeneID:389158"
/db_xref="HGNC:HGNC:19952"
/translation="MASKDAQNQRRGLPGFLPGAPDPDQSLPASSNPGNQAWQLSLPL
PSSFLPTLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCS
TLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPF
LPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVF
TNADNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHSLAGL"
BASE COUNT 293 a 211 c 201 g 264 t
ORIGIN
1 ctttgaagaa gtgactcaga catcttcatg gcctctaaag atgcccagaa ccaaagaaga
61 ggtctgcctg gttttcttcc tggagctcca gacccagacc aaagccttcc tgcctcttcc
121 aatccaggga accaagcatg gcagctgagt ctccctctgc caagcagttt cctgccaaca
181 ttagacctga taattataca ccagcaggtg gagctgcttg gaatgatact tggtactgag
241 acctccaaca aatatgagat taaaaacagc ttgggacaaa gaatttactt tgcagtggag
301 gaaagcatct gcttcaatcg tactttctgt tccactctgc gatcttgcac cctgaggatc
361 acagataact caggtcgaga ggtcattaca gtgaacaggc ccttgagatg taacagctgc
421 tggtgccctt gctacctaca agagttagaa atccaagccc ctcctggtac tatagttggt
481 tacgttacgc agaagtggga cccctttctg cctaaattca caatccaaaa tgcaaacaaa
541 gaagatattt tgaaaattgt tggtccttgt gtgacatgtg gctgttttgg cgatgtggat
601 tttgaggtga aaaccattaa tgaaaagctt acaattggga agatttcaaa gtactggtca
661 ggatttgtaa atgatgtctt cacaaatgct gacaatttcg gaattcatgt tcctgcagat
721 ctagatgtaa cagtcaaagc agcaatgatc ggtgcctgtt ttctctttga ttttatgttc
781 tttgaacatt cactggctgg attataataa ccaagataat gaaaacaata aaatatgcag
841 aacatatttc aaattattta gagtatttca aagcacttcc acacatatga atggcctgca
901 ctggacctca caagaaaaca gagggtttca actgtgcata acatcagaga tgaccaggtg
961 caacctcca
//