LOCUS BC171889 1327 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens pepsinogen 5, group I (pepsinogen A), mRNA (cDNA clone
MGC:198604 IMAGE:9054543), complete cds.
ACCESSION BC171889
VERSION BC171889.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1327)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1327)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 19 Row: A Column: 5.
FEATURES Location/Qualifiers
source 1..1327
/db_xref="H-InvDB:HIT000503620_02"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198604 IMAGE:9054543"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TGGGCGGG"
gene 1..1327
/gene="PGA5"
/db_xref="GeneID:5222"
/db_xref="HGNC:HGNC:8887"
/db_xref="MIM:169730"
CDS 52..1218
/gene="PGA5"
/codon_start=1
/product="pepsinogen 5, group I (pepsinogen A)"
/protein_id="AAI71889.1"
/db_xref="GeneID:5222"
/db_xref="HGNC:HGNC:8887"
/db_xref="MIM:169730"
/translation="MKWLLLLGLVALSECIMYKVPLIRKKSLRRTLSERGLLKDFLKK
HNLNPARKYFPQWEAPTLVDEQPLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWV
PSVYCSSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTN
QIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLS
ADDKSGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGETIACAEGCQAIV
DTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPS
AYILQSEGSCISGFQGMNVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA"
BASE COUNT 269 a 433 c 331 g 294 t
ORIGIN
1 caccttcctc ccatcttgcc ttctccctcg agttgggacc cgggaagaac catgaagtgg
61 ctgctgctgc tgggtctggt ggcgctctct gagtgcatca tgtacaaggt ccccctcatc
121 agaaagaagt ccttgaggcg caccctgtcc gagcgtggcc tgctgaagga cttcctgaag
181 aagcacaacc tcaacccagc cagaaagtac ttcccccagt gggaggctcc caccctggta
241 gatgaacagc ccctggagaa ctacctggat atggagtact tcggcactat cggcatcgga
301 actcctgccc aggatttcac cgtcgtcttt gacaccggct cctccaacct gtgggtgccc
361 tcagtctact gctccagtct tgcctgcacc aaccacaacc gcttcaaccc tgaggattct
421 tccacctacc agtccaccag cgagacagtc tccatcacct acggcaccgg cagcatgaca
481 ggcatcctcg gatacgacac tgtccaggtt ggaggcatct ctgacaccaa tcagatcttc
541 ggcctgagcg agacggaacc tggctccttc ctgtattatg ctcccttcga tggcatcctg
601 gggctggcct accccagcat ttcctcctcc ggggccacac ccgtctttga caacatctgg
661 aaccagggcc tggtttctca ggacctcttc tctgtctacc tcagcgccga tgacaagagt
721 ggcagcgtgg tgatctttgg tggcattgac tcttcttact acactggaag tctgaactgg
781 gtgcctgtta ccgtcgaggg ttactggcag atcaccgtgg acagcatcac catgaacgga
841 gagaccatcg cctgtgctga gggctgccag gccattgttg acaccggcac ctctctgctg
901 accggcccaa ccagccccat tgccaacatc cagagcgaca tcggagccag cgagaactca
961 gatggcgaca tggtggtcag ctgctcagcc atcagcagcc tgcccgacat cgtcttcacc
1021 atcaatggag tccagtaccc cgtgccaccc agtgcctaca tcctgcagag cgaggggagc
1081 tgcatcagtg gcttccaggg catgaacgtc cccaccgaat ctggagagct ttggatcctg
1141 ggtgatgtct tcatccgcca gtactttacc gtcttcgaca gggcaaacaa ccaggtcggc
1201 ctggcccctg tggcttaagc ctaagtctct tcagccacct cccaggaaga tctggcctcc
1261 gtcctatgcc cactttagat gtatctaatt ctcctgactg ttcttcccag gggagtgtgg
1321 aggtctt
//