LOCUS BC171885 2135 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens rcRPE, mRNA (cDNA clone MGC:198600 IMAGE:9054539),
complete cds.
ACCESSION BC171885
VERSION BC171885.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2135)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2135)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 19 Row: E Column: 19.
FEATURES Location/Qualifiers
source 1..2135
/db_xref="H-InvDB:HIT000503616"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198600 IMAGE:9054539"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CGCATCGG"
gene 1..2135
/gene="LOC729020"
/db_xref="GeneID:729020"
CDS 113..799
/gene="LOC729020"
/codon_start=1
/product="LOC729020 protein"
/protein_id="AAI71885.1"
/db_xref="GeneID:729020"
/translation="MASGCKIGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFV
PNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPG
TLIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKV
HWLRTQFPSLDIEGDGGVGSDTVHKCAEAGANMTVSGSAIMRSEDPRSVINLLRNICS
EAAQKRSLDR"
BASE COUNT 637 a 380 c 463 g 655 t
ORIGIN
1 ctggccaaac tgtggttctt tggtagaatt tcctggtttt aaaaaaaaaa aaaaagtggg
61 ctctagtctt gccggggact cgtggggtaa cttgttcttg ggagccagcg gtatggcgtc
121 gggctgcaag attggcccgt ccatcctcaa cagcgacctg gccaatttag gggccaagtg
181 cctccagatg ctagactctg gggccgatta tctgcatctg gatgtaatgg atgggcattt
241 tgttcccaac atcacctttg gtcaccctgt ggtagaaagc cttcgaaagc agctaggcca
301 ggaccctttc tttgacatgc acatgatggt gtccaagcca gaacagtggg taaagccaat
361 ggctgtagca gaagccaatc agtacacctt tcatctcgag gctactgaga acccagggac
421 tttgattaaa gacattcggg agaatgggat gaaggttggc cttgccatca aaccaggaac
481 ctcagttgag tatttggcac catgggctaa tcaaatagat atggccttgg ttatgacagt
541 ggaaccgggg tttggagagc agaaattcat ggaagatatg atgccaaagg ttcactggtt
601 gaggacccag ttcccatctt tggatataga gggcgatggt ggagtaggtt ctgacactgt
661 ccataagtgt gcagaggcag gagctaacat gactgtatct ggcagtgcta ttatgaggag
721 tgaagacccc agatctgtga tcaacctatt aagaaatatt tgctcagaag ctgctcagaa
781 acgttctctt gatcgatgaa accataagga gcccaatgtt tctgttcatg aaatctccct
841 tttactggaa aacaggaata ttgactacca aatcatcatg aaattgaagc tgtactgctt
901 ttttgagcag ttattcattc cagtgattaa aactgattgt gcagaatatt ctaagaggtc
961 agaaattggt gtgtataact acatttttag tgatgcaatt taatgattag tgagtaagat
1021 actgttttta ttgagagact tgatttttat aaagagtaaa aatacggctg cattaaggtt
1081 acaaacagaa aagtgtctta atgcctaagg agggcatatt agctacacta caaaaacaaa
1141 ttttgtctgt acttctgaaa agaattttgt tgtttctcag ctgttttcca aaagcaaagg
1201 aagtctttat ggcttttttc tatttcatgt tatttgtgat ttgtttataa gtttgggtgg
1261 gatggcatac catattcttg gttcttaaaa tctatcactt ttcaccttac acttaatgtg
1321 taaaaactat aaaaacaatg cgtgaaaccc aggggttcta aaatacaagc atagatttta
1381 tcagggtgtt tttgtcaaag caggttattc agtgattcct ccccaccatt cttaaggacg
1441 ttaaataatg ctgttgtgtt agctctgagt agaaaggaaa aagtaaaaac ctctgtatgg
1501 aagtaatatt gggttgaatt ctgactgccc ttttctagct ggacctttaa caaatcaccc
1561 agtctttttt gtgtttctct gaagtcattt atacattaaa tgtaattata acaactgtgg
1621 ggttgtgttg agaattaaga ggtaacacta tatatgtaaa gtttctagca ctagtcccag
1681 aatttagaat atgctcaata caaagtagat agcattatat aagtttatat ttttgtgagt
1741 tataaagtac tttgatatat tctcattaaa tctgtaaatc acctctataa gtaagtggta
1801 ataataaagc agatattttt gtccccattt aaaaaaaaaa aaaaaaagtg ttccctaaca
1861 gtttccagag cacgagctga agggattgat gggctcctca aaggctatac acttttcatg
1921 gccttgtctc ttccaggtac agtgctggct acttttacat atatgttgtc aacaaatcct
1981 caggataatt ctaaggcaat tctactgcaa atgagatact atcttaattt acagttgaca
2041 aaaactgagt ctcaggaagg ttgcctgacc tgctcaaggt catatagcta gtaagggtgc
2101 agtataggtt cgaacccacc tgcctgatta cgtct
//