LOCUS BC171875 1425 bp mRNA linear HUM 02-JAN-2009 DEFINITION Homo sapiens surfactant protein A1B, mRNA (cDNA clone MGC:198590 IMAGE:9054529), complete cds. ACCESSION BC171875 VERSION BC171875.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1425) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1425) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 19 Row: C Column: 15. FEATURES Location/Qualifiers source 1..1425 /db_xref="H-InvDB:HIT000503606" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:198590 IMAGE:9054529" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_362" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TACACTCT" gene 1..1425 /gene="SFTPA1B" /gene_synonym="AC068139.6" /gene_synonym="PSAP" /gene_synonym="PSPA" /gene_synonym="SFTP1" /gene_synonym="SFTPA1" /db_xref="GeneID:6435" /db_xref="HGNC:HGNC:23439" /db_xref="MIM:178630" CDS 58..804 /gene="SFTPA1B" /gene_synonym="AC068139.6" /gene_synonym="PSAP" /gene_synonym="PSPA" /gene_synonym="SFTP1" /gene_synonym="SFTPA1" /codon_start=1 /product="SFTPA1B protein" /protein_id="AAI71875.1" /db_xref="GeneID:6435" /db_xref="HGNC:HGNC:23439" /db_xref="MIM:178630" /translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG RGKEQCVEMYTDGQWNDRNCLYSRLTICEF" BASE COUNT 313 a 407 c 411 g 294 t ORIGIN 1 cagagaccca agcagctgga ggctctgtgt gtgggagcag cgactggacc cagagccatg 61 tggctgtgcc ctctggccct caacctcatc ttgatggcag cctctggtgc tgtgtgcgaa 121 gtgaaggacg tttgtgttgg aagccctggt atccccggca ctcctggatc ccatggcctg 181 ccaggcaggg acgggagaga tggtctcaaa ggagaccctg gccctccagg ccccatgggt 241 ccacctggag aaatgccatg tcctcctgga aatgatgggc tgcctggagc ccctggtatc 301 cctggagagt gtggagagaa gggggagcct ggcgagaggg gccctccagg gcttccagct 361 catctagatg aggagctcca agccacactc cacgacttta gacatcaaat cctgcagaca 421 aggggagccc tcagtctgca gggctccata atgacagtag gagagaaggt cttctctagc 481 aatgggcagt ccatcacttt tgatgccatt caggaggcat gtgccagagc aggcggccgc 541 attgctgtcc caaggaatcc agaggaaaat gaggccattg caagcttcgt gaagaagtac 601 aacacatatg cctatgtagg cctgactgag ggtcccagcc ctggagactt ccgctactca 661 gatgggaccc ctgtaaacta caccaactgg taccgagggg agcctgcagg tcggggaaaa 721 gagcagtgtg tggagatgta cacagatggg cagtggaatg acaggaactg cctgtactcc 781 cgactgacca tctgtgagtt ctgagaggca tttaggccat gggacaggga ggatcctgtc 841 tggccttcag tttccatccc caggatccac ttggtctgtg agatgctaga actccctttc 901 aacagaattc acttgtggct attagagctg gaggcaccct tagccacttc attcccctga 961 tgggccctga ctcttcccca taatcactga ccagccttga cactcccctt gcaaaccatc 1021 ccagcactgc accccaggca gccactccta gccttggcct ttggcatgag atggaggcct 1081 ccttattctc catctggtcc agttccttca cttacagatg gcagcagtga ggccttgggg 1141 tagaaggatc ctccaaagtc acacagagtg cctgcctcct ggtcccctca gctctgcctc 1201 tgcagcccac tgcctgccca gtgccatcag gatgagcagt accggccaag cataatgaca 1261 gagagaggca gatttcaggg aagccctgac tgtgtggagc taaggacaca gtggagattc 1321 tctggcactc tgaggtctct gtggcaggcc tggtcaggct ctccaggtgg tcagagggcc 1381 cagtggtgcc ccagcacggt ggtgcccaag ccaaccctgt gactg //