LOCUS BC171849 3326 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens transmembrane protein 167B, mRNA (cDNA clone
MGC:198564 IMAGE:9054503), complete cds.
ACCESSION BC171849
VERSION BC171849.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3326)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3326)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 18 Row: L Column: 10.
FEATURES Location/Qualifiers
source 1..3326
/db_xref="H-InvDB:HIT000503580"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198564 IMAGE:9054503"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_286"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GTCAAGCC"
gene 1..3326
/gene="TMEM167B"
/gene_synonym="AD-020"
/db_xref="GeneID:56900"
/db_xref="HGNC:HGNC:30187"
CDS 1071..1295
/gene="TMEM167B"
/gene_synonym="AD-020"
/codon_start=1
/product="transmembrane protein 167B"
/protein_id="AAI71849.1"
/db_xref="GeneID:56900"
/db_xref="HGNC:HGNC:30187"
/translation="MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGV
FYKAAVIGTRLHAAVAIACVVMAFYVLFIK"
BASE COUNT 866 a 704 c 767 g 989 t
ORIGIN
1 cgacgacgtg gtgctttagg atctgaaaga tgcgacttgg tttttgttgt tgttgttgtt
61 gttgttgttg tttttgagac ggagtttccg ctcttgttgc ccaggctgga gtgcaatggc
121 gcgatctcgg ctcaccgcaa cctccgcctc ccaggttcaa gcgattctcc tgcctcggcc
181 tcccgagtag ctgggattac attacaggca tgagccacca tgcccggcta attttgtatt
241 tgtagtagag acggggtttc tccatgttgg tcaggctggt ctcgaactac gatctcaggt
301 gatccgcctg cctcggcctc ctaaagtgct tagattacag gcatgagcca ccgcgcccgg
361 ctaattttgt atgtttagta gagacggggt ttctccttgt tggtcaggct ggtctcgaac
421 tccgacctca ggtgatccgc ctggctcggc ctcccaaagt gctgggatta caggcgtgaa
481 ccaccgcgcc cggccgcgac ttgtttttgt tacaaggttc ctcatttcat ttgcaacgtt
541 cagacgcagt ctgactagat ttccatccgg agtaaggaag agcagctcaa gggcagtcac
601 ggaggccgca ggtgcggctt cttcacccgc ggtgctggag ttctctcaag tggaagccca
661 ggacgatgaa aacctcatag gtaggctgct gcttacacac agcagccgcc acggcgcaaa
721 ataaactaca aaactacaag cctttacctt ttcaaacaca ctgacgcggg ccagccccag
781 ccctacgccc gcaggggcac gcagaaaaga cttagttacc acggccaagt acgaagcctt
841 cgagatagcg ttcttcttac cctacgtaaa cacgcagttt cccgagctcg acaatcggct
901 agccactcct gatagcgttc ggcgctcgcc tctcggccct tgctcctgcg tactacggct
961 tcttccagtc acctcggccc ggatcgggaa gtgtcaagcg ggcgctcccc catctccgcc
1021 gctattacca ctgaacccgg accccctacc caggtccagg gccagccgcc atgacgaacg
1081 tgtactcctt ggatgggatt ctggtgtttg gtttgctctt tgtttgcacc tgtgcctact
1141 tcaagaaagt acctcgtctc aaaacctggc tgctatcaga gaagaagggt gtttggggtg
1201 tgttttacaa agccgctgtg attggaacca ggctgcatgc tgctgtggca attgcttgtg
1261 ttgtaatggc cttttacgtc ctgtttataa aatgaattcc aaagcaccca agtcatcaac
1321 tgccaaccaa ggggacgggg atgaagaacc tgttggagac ctgaacccag tgtaggagag
1381 ttcagctgaa atcatcggtc cccaggatga caccacagca tctgcccctg ctatatgtgg
1441 ggaaaactca tggtcacgaa cattatttat gcttcagggg actacagaaa gccagcttcc
1501 tttgatctat gtgtaaatca gtccttggca gagtgcatat aatgtccgga taaattacac
1561 ccctcggtga taagattaca tacctccttc ataaaaacct gtcatcctgt tttgttcttc
1621 agctcctcat caggatcttt tcaaactgag gctcattagg gaaggaacta ggctgtgttc
1681 agacttcttt tgaagagaga gaattttcaa gacttctttt cactctttga tttggatctg
1741 gcaaattggg gaggggatgc tgggtgggaa acagttatga aatgccaaga aattctttgg
1801 ctttagaaat ttatctttca tgtacccatc cgggaacata aaagagaggc atagtgctca
1861 ttgcaaaaag agaacagatg aagtagctgt gttatgtgct ggtatcttga gagttttgcc
1921 aagaaaatct gggcctacat aaaatttgag aattatctgt gtgatgagac cagaaagcag
1981 tggcttagac aagaaaaaat ctttctgttc accagtatcc tcaaatggag acttcacttg
2041 atcagatggt atatgaaaaa tgaatcaact attgctattt cgtaaaacct ttttatattt
2101 tctaaattta cttagtgcta aatactgtta ctcagtttta aatgccacga ctaggggaaa
2161 aagaaactat tgaagaaata attgtttagt atatttgcag ttggggtaga agaaagaaat
2221 ctagtatatt gattcatata ctagtaaatt catctagtat aagaacttgt gatgttagat
2281 tgaagttttg tcatcttata aaagacaaca aacttatttt ctgtttaagt ctgagtgtta
2341 tggcaatttt tagttgatta cttatttttc ttagccaaat tttaattttc ttcatattgc
2401 attgctcttt agttgtctct ggaaattcta tttactttaa ggacatgaga aattcaaatg
2461 agagaagttg ctgatattca tcagtgtgtt tggacagttc atagggtcca caaatcaaat
2521 gaggttgttt cctgaagtag aagaaaacag aactttgcaa ttgatactga agtactttgc
2581 catggagtta gtaactcctg agcagaccat tttagatggc tcagcatttg gcaggaagac
2641 ttctccattc cctgcttata tctatggaag gatcagctgt tggatgtcta gaacttctct
2701 atttaaaaaa aaagagtagg tctaaaatta aattattata agcaagcata gacatgggtc
2761 ttccagttga attgtccatt accgtaaaac ttaatggtgg acaagttagc tgtggttgat
2821 tcctgtgtgg cagtaaattg tcttctgtct gcttactcca aataataaaa gctgctagga
2881 agtttagatt ttgaaatagg cagtttaatg ctttgagggt ttctagaaat acagaaagtc
2941 atcaagtaaa cactgcatgt ctaatcatct cagagttgtg gctgttatct cttcaggaat
3001 tggtccacag ggtaaatttc aacaattcat acgttttcca ttgtcatttc tgaggacctt
3061 tgagatgaga gaaaggaaat ctagtggaac aggaaagaga gttacacctt gtgggtgtga
3121 gtttgggacc tgttggcaga agggaatgtc actccctgga aacaggttca gcatgtttgc
3181 acttgttatt ttgtagcttt aatgattttt gttttctaat agggcaaatg tctctaagct
3241 tggtgtttag agctgcttca tattttaaac tagttccatt ccacagttct agttcaaacc
3301 agtttttaca gcctcctggg ttgggt
//