LOCUS BC171789 954 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens chromosome 15 open reading frame 54, mRNA (cDNA clone
MGC:198504 IMAGE:9054443), complete cds.
ACCESSION BC171789
VERSION BC171789.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 18 Row: O Column: 24.
FEATURES Location/Qualifiers
source 1..954
/db_xref="H-InvDB:HIT000503520"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198504 IMAGE:9054443"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCCTGACC"
gene 1..954
/gene="C15orf54"
/db_xref="GeneID:400360"
/db_xref="HGNC:HGNC:33797"
CDS 177..728
/gene="C15orf54"
/codon_start=1
/product="C15orf54 protein"
/protein_id="AAI71789.1"
/db_xref="GeneID:400360"
/db_xref="HGNC:HGNC:33797"
/translation="MEVKFITGKHGGRRPQRAEPQRICRALWLTPWPSLILKLLSWII
LSNLFLHLRATHHMMELPLRFLYIALSEMTFREQTSHQIIQQMSLSNKLEQNQLYGEV
INKETDNPVISSGLTLLFAQKPQSPGWKNMSSTKRVCTILADSCRAQAHAADRGERGH
FGVQILHHFIEVFNVMAVRSNPF"
BASE COUNT 283 a 206 c 222 g 243 t
ORIGIN
1 ttgggagaaa ggggcaggta acagactgga gtgaggagac tgaggagaaa ctgtagagaa
61 taatacttag gagtacacgt gctggattct ctcattaagt taaagagcag gatgatgtct
121 gaagtggctg aaacacatat ggcttcagtg tgtcaagaag acctgaaaga tcccacatgg
181 aagtgaaatt cattactggc aagcacggtg gcaggagacc ccagagggct gagccgcaaa
241 gaatttgcag agccttatgg ctaactccat ggcctagttt gatcttgaag ttactgtctt
301 ggataatcct ctcaaatctg ttcctgcact taagagccac tcatcacatg atggagctcc
361 ctctcaggtt cctttacatc gccctgtcag aaatgacttt cagggaacag acatcacatc
421 aaatcatcca acagatgtcc ctttcaaata agttggagca gaaccaacta tatggagaag
481 tcataaacaa agaaacagac aacccagtga tttccagcgg attgacatta ctctttgcac
541 agaaacctca gtctcctggg tggaagaaca tgagttcaac aaagcgtgtg tgcactatat
601 tggctgactc ttgccgtgct caggctcatg ctgctgacag gggagagagg ggacattttg
661 gagtccaaat cttgcatcat ttcattgaag tgttcaatgt catggctgta agaagtaacc
721 cattttaata actggcatca aaggatttag gagagagaaa cccagtatcc agacccattt
781 ccgtcagtga cactctcctc gtattgggag gattggccag aatcgtctga ttcctgtttc
841 tgatttcctt cctcactggc atcagagtat tgcactatag gaaaactaat atctaactga
901 gctccaagtg ctaaataaca gcatctcatg ttcattccgg gtcaccaaga ggtt
//