LOCUS BC171787 5920 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens benzodiazapine receptor (peripheral) associated
protein 1, mRNA (cDNA clone MGC:198502 IMAGE:9054441), complete
cds.
ACCESSION BC171787
VERSION BC171787.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5920)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5920)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 18 Row: D Column: 5.
FEATURES Location/Qualifiers
source 1..5920
/db_xref="H-InvDB:HIT000503518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198502 IMAGE:9054441"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_363"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: TGTGTAAC"
gene 1..5920
/gene="BZRAP1"
/gene_synonym="PRAX-1"
/gene_synonym="PRAX1"
/gene_synonym="RIM-BP1"
/gene_synonym="RIMBP1"
/db_xref="GeneID:9256"
/db_xref="HGNC:HGNC:16831"
/db_xref="MIM:610764"
CDS 165..5711
/gene="BZRAP1"
/gene_synonym="PRAX-1"
/gene_synonym="PRAX1"
/gene_synonym="RIM-BP1"
/gene_synonym="RIMBP1"
/codon_start=1
/product="BZRAP1 protein"
/protein_id="AAI71787.1"
/db_xref="GeneID:9256"
/db_xref="HGNC:HGNC:16831"
/db_xref="MIM:610764"
/translation="MEQLTTLPRPGDPGAMEPWALPTWHSWTPGRGGEPSSAAPSIAD
TPPAALQLQELRSEESSKPKGDGSSRPVGGTDPEGAEACLPSLGQQASSSGPACQRPE
DEEVEAFLKAKLNMSFGDRPNLELLRALGELRQRCAILKEENQMLRKSSFPETEEKVR
RLKRKNAELAVIAKRLEERARKLQETNLRVVSAPLPRPGTSLELCRKALARQRARDLS
ETASALLAKDKQIAALQRECRELQARLTLVGKEGPQWLHVRDFDRLLRESQREVLRLQ
RQIALRNQRETLPLPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKE
QRVQQLESELSKKRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGR
ATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQ
LEVEHEQARLSLREKQEEVRRLQQAQAEAQREHEGAVQLLESTLDSMQARVRELEEQC
RSQTEQFSLLAQELQAFRLHPGPLDLLTSALDCGSLGDCPPPPCCCSIPQPCRGSGPK
DLDLPPGSPGRCTPKSSEPAPATLTGVPRRTAKKAESLSNSSHSESIHNSPKSCPTPE
VDTASEVEELEADSVSLLPAGPEGSRGGARIQVFLARYSYNPFEGPNENPEAELPLTA
GEYIYIYGNMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLLTSLPPELADLSHSSGP
ELSFLSVGGGGSSSGGQSSVGRSQPRPEEEDAGDELSLSPSPEGLGEPPAVPYPRRLV
VLKQLAHSVVLAWEPPPEQVELHGFHICVNGELRQALGPGAPPKAVLENLDLWAGPLH
ISVQALTSRGSSDPLRCCLAVGARAGVVPSQLRVHRLTATSAEITWVPGNSNLAHAIY
LNGEECPPASPSTYWATFCHLRPGTPYQAQVEAQLPPQGPWEPGWERLEQRAATLQFT
TLPAGPPDAPLDVQIEPGPSPGILIISWLPVTIDAAGTSNGVRVTGYAIYADGQKIME
VASPTAGSVLVELSQLQLLQVCREVVVRTMSPHGESADSIPAPITPALAPASLPARVS
CPSPHPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPGAPPASPSREMAKGSHED
PPAPCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAAPSLAKQEAEWTAGEACPASSS
TQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAELGVHLVNSLVDHGRNSDLSDIQE
EEEEEEEEEEEELGSRTCSFQKQVAGNSIRENGAKSQPDPFCETDSDEEILEQILELP
LQQFCSKKLFSIPEEEEEEEEDEEEEKSGAGCSSRDPGPPEPALLGLGCDSGQPRRPG
QCPLSPESSRAGDCLEDMPGLVGGSSRRRGGGSPEKPPSRRRPPDPREHCSRLLSNNG
PQASGRLGPTRERGGLPVIEGPRTGLEASGRGRLGPSRRCSRGRALEPGLASCLSPKC
LEISIEYDSEDEQEAGSGGISITSSCYPGDGEAWGTATVGRPRGPPKANSGPKPYPRL
PAWEKGEPERRGRSATGRAKEPLSRATETGEARGQDGSGRRGPQKRGVRVLRPSTAEL
VPARSPSETLAYQHLPVRIFVALFDYDPVSMSPNPDAGEEELPFREGQILKVFGDKDA
DGFYQGEGGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGYLSPDILLEGSAHTTGPPPK
PRRSKKAESEGPAQPCPGPPKLVPSADLKAPHSMVAAFDYNPQESSPNMDVEAELPFR
AGDVITVFGGMDDDGFYYGELNGQRGLVPSNFLEGPGPEAGGLDREPRTPQAESQRTR
RRRVQC"
BASE COUNT 1223 a 1795 c 1973 g 929 t
ORIGIN
1 agcctccttt gtgggtgggg aagagctcag ccaaccttgg atggagcgtc ggtgaagcaa
61 gagctcagag gggagagggg ctggcctggc atgaccctcg ccagtccccc cacctggctg
121 ggtgatgtcc cccggcccgg gttctggggc cccttggcag taccatggag caactgacaa
181 ccctcccacg gcctggggac cctggagcca tggagccatg ggcactgccc acctggcata
241 gctggactcc aggtcgaggg ggtgaaccta gcagtgcagc cccaagcatc gctgatactc
301 ctccggcagc tctgcagctt caagaactga ggtctgagga gagttccaag cccaaaggag
361 acgggagctc caggcccgtg gggggaactg accctgaagg agcagaggct tgtctgccca
421 gcctgggcca gcaagcatcc agctctggac ccgcctgcca gaggccagag gatgaggaag
481 tggaggcttt cctgaaggcc aagctgaata tgagctttgg ggacaggccc aatctggagc
541 tgctgagggc cctgggggag ctgcggcagc gctgtgccat ccttaaggag gaaaaccaga
601 tgctgaggaa gagcagcttc cctgagacag aagagaaggt gcggaggctg aagaggaaga
661 acgccgagct ggcggtcatt gccaagcgcc tggaggagag ggcccgaaag ctgcaggaaa
721 cgaacctgag ggtggtgagt gcccccttgc cccggccggg gaccagcttg gagttgtgtc
781 ggaaggccct agcccgccag cgagcccggg acctcagtga gacagccagt gcactgctgg
841 ccaaggacaa gcagattgct gccttgcagc gggagtgcag ggagctgcag gccaggctca
901 ctctggtggg caaggagggt ccccagtggc tccacgtgcg ggacttcgat cggctgctgc
961 gcgagtccca gcgggaggtg ctgcggctgc agaggcagat cgcgctgcgc aaccagcggg
1021 agacgctccc gctcccgccg tcctggcccc cgggccctgc tctccaggcc agagcagggg
1081 cgcctgctcc cggggccccg ggagaggcca cgccccagga ggatgcggac aacctacccg
1141 tgattctagg ggagccagag aaagagcaga gggtgcagca gctggaatcg gagctcagca
1201 agaagcggaa gaaatgcgag agcctggagc aggaagcccg gaaaaagcag aggcgatgtg
1261 aggagctgga actgcagctg agacaagcgc agaatgagaa tgcccgcctg gtggaggaga
1321 actcccggct cagtgggaga gccacagaga aggagcaggt ggagtgggag aatgcggagc
1381 tgaggggcca gctcctgggg gtgacacagg agagggactc agcccttcgc aagagccagg
1441 gcctgcagag caagctggag agcctggagc aagtgctgaa gcacatgcgg gaggtggccc
1501 agcggcggca gcagctggag gtggagcatg aacaggctcg gctcagccta cgggagaagc
1561 aggaggaggt ccggagactg cagcaggccc aggctgaagc ccagagggaa catgaaggag
1621 ccgtgcagct gctggagtct accttggatt ccatgcaggc ccgggttcga gagctcgaag
1681 aacagtgccg cagccaaacc gagcagttca gcctcctggc acaggaactc caggctttcc
1741 gcctgcaccc gggccccttg gatctgctca catctgccct ggactgtggg agccttggag
1801 actgcccacc acccccctgc tgctgctcca ttccccagcc ttgccggggg tctggcccca
1861 aagaccttga cctcccgccg ggctcccctg ggcgctgcac cccaaagtct tccgagcctg
1921 cccctgccac tctcactggg gtccctcgaa ggacagccaa gaaggcagag tctctctcca
1981 actcctccca ctccgagtcc atccacaaca gccccaagtc atgccctaca cctgaggtgg
2041 acacagccag tgaggtagag gagctggagg cagacagtgt ctccctgctc ccagctgggc
2101 cagagggcag ccggggagga gccaggatcc aggtcttcct agcacgttat agctacaacc
2161 cctttgaggg tcccaatgag aatccagaag cagagcttcc gctgacagct ggcgagtaca
2221 tctacatcta tggcaacatg gatgaggatg gcttttttga aggagagctc atggatggcc
2281 gaaggggcct ggtcccttcc aattttgtag agcgtgtgtc ggatgatgac ctcctgacct
2341 ccctccctcc agagctggcc gatttgtccc acagctcagg ccctgaactc agtttcctga
2401 gtgtaggtgg gggtggcagc agtagcgggg gccaaagcag tgtgggaagg agccagccca
2461 gacctgagga ggaggatgca ggggacgagc tcagtctgag cccatcaccg gagggcctgg
2521 gcgagcctcc tgccgtgcct tacccccgcc gtctggtggt cctcaagcag ctggcccaca
2581 gcgtggtgct ggcctgggag ccgcctcctg agcaagtgga gctacacggc ttccatatct
2641 gtgtgaatgg ggagctgcga caggccctgg ggcctggggc gccacccaag gccgtgctgg
2701 agaacctgga cctgtgggcc gggccccttc acatttctgt ccaggccctg actagccggg
2761 gcagctctga cccactgcgc tgttgcttgg cggtgggtgc ccgggccgga gtggtgccca
2821 gccagctgcg ggtccatcgg ttgacagcca catctgctga gatcacctgg gtgcccggca
2881 atagcaactt ggcccatgcc atctacctca atggggaaga gtgcccacct gccagcccca
2941 gtacctactg ggccaccttc tgccacttac ggcctggcac accctatcag gcccaagtgg
3001 aggctcagct cccaccccaa gggccctggg aaccaggctg ggagaggctg gagcagcggg
3061 ctgccaccct gcagttcacc acactcccag caggcccacc tgatgcccct ctggatgtgc
3121 agatcgagcc tgggccctcc cctgggatct tgatcatcag ttggctccca gtcaccatcg
3181 atgctgctgg cacatccaac ggtgtccggg tcacaggcta tgccatctac gctgatgggc
3241 agaagatcat ggaggtggcc tcacccacgg caggcagtgt actggtggag ttgtcccagc
3301 tgcagctgct gcaggtgtgt cgtgaggtgg tcgtgcgcac catgtcgccc cacggggagt
3361 cggcggactc catcccggct cctatcactc ccgccctggc tccggccagc ctgccagccc
3421 gagtctcctg cccctcaccg cacccaagcc cagaggccag agcgcccctt gcttcagcct
3481 ccccagggcc tggagacccc agctctcctc tccagcaccc tgctcccctt ggaactcaag
3541 agcctccagg agcaccccct gcaagccctt ccagagagat ggcaaaaggg tcccacgagg
3601 accctccagc accttgctcc caggaggagg ctggggcagc agtgctgggc acctcagagg
3661 agaggacagc cagcacatct accctgggtg agaaggaccc tggccccgca gctccctcac
3721 tggccaagca ggaggccgag tggactgcag gagaggcctg tccggcctcc agctccaccc
3781 agggagcacg ggcccagcag gcgccaaata ccgagatgtg ccaaggagga gacccagggt
3841 ctgggctgag gcccagggct gagaaggagg acacagcaga gcttggggtt catctggtga
3901 actccctcgt ggaccacggc cgcaactcag acctgtcaga catccaggag gaagaggaag
3961 aggaggagga ggaggaggaa gaggagctgg gttccaggac ttgctccttc cagaagcagg
4021 ttgctggcaa cagcatcagg gagaatgggg ccaagtccca gcccgacccc ttttgtgaga
4081 ctgacagcga tgaggagatc ttggagcaga tcctggagct gcccctccag cagttctgta
4141 gcaagaagct ctttagcatc ccggaggagg aggaagagga agaggaggac gaggaggagg
4201 agaagtcagg ggcaggctgt tcttcccgag accctggccc gcctgaacct gcattgctgg
4261 ggctgggctg tgacagtggt cagccccgaa gacctggcca gtgtcccttg tctcctgagt
4321 cctccagggc tggagactgc ctggaagaca tgcctggatt agttggtgga agcagccgga
4381 ggagaggagg gggctcccct gagaagcccc caagccgcag gcggcctcca gatccccgag
4441 aacactgcag ccgacttctc agcaacaatg ggccccaggc ctctggacga ctgggcccca
4501 cacgggagag gggtggcctc cccgtaattg agggccccag gactggacta gaggctagcg
4561 ggagaggccg gctgggccct tcccggaggt gctcccgtgg ccgggcgctg gagcctggcc
4621 tggccagctg cctttccccc aagtgcttgg aaatcagcat tgaatatgat tcggaggatg
4681 agcaggaggc gggcagcggg ggcatcagca tcaccagctc ctgctaccct ggagatgggg
4741 aggcctgggg cacagcaact gtaggaaggc ccagggggcc tccgaaggcc aattcaggcc
4801 ccaagcccta cccacgcctc ccagcctggg agaaagggga accagagcgg agaggccgca
4861 gtgcgacggg cagagccaag gagccactct cccgggcaac agagaccgga gaggccagag
4921 ggcaggacgg ctctgggcgg aggggccccc agaagagagg tgtccgagtc ctcaggccaa
4981 gcactgcaga gctagtccct gcgaggagcc cctcagaaac actggcttac cagcacctac
5041 ccgtcaggat ctttgtggct ctgtttgact atgaccccgt gtcaatgtcg cccaatcctg
5101 atgctggaga agaagagctt cccttccgag agggtcagat cctgaaggtg tttggggaca
5161 aggatgccga tggcttctac cagggcgaag gtgggggccg gacaggctac attccctgca
5221 acatggtggc tgaggtggct gtggacagcc ctgctgggag acaacaactg ctccagcggg
5281 gttatttgtc cccagatatt ctccttgagg gctcagccca cacaactggg cctcctccca
5341 agccccgccg ctccaagaaa gctgagtcgg aaggccctgc ccagccctgt ccaggccccc
5401 ctaagctggt cccctctgct gacctgaaag ctccccactc catggtggct gcatttgact
5461 acaaccccca ggagagttcc cccaatatgg acgtggaggc agagctgccc ttccgggcag
5521 gggatgtcat tactgtgttt gggggcatgg acgatgacgg tttctactat ggggaattaa
5581 atggacaaag gggcctggtt ccatccaact tcctggaggg ccctgggcct gaggcaggcg
5641 gcctggacag ggaacccagg acaccccagg ctgagagtca gagaacgagg aggagaagag
5701 tccagtgcta gatggagata gatatatgta gagagagcaa catgactggg gctgcaccac
5761 acaagggtcc ccagggcccc caggtgggcc ttgtaccccc agctctggca gcgcccccag
5821 gattgaacgt ggggagcccc agggcagaag cgagaaggtg tggggtttct tctccaaggg
5881 gaagcagctc ctcaggaggc tgggctctgg gaagaaggag
//