LOCUS BC171781 4173 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens zinc finger CCCH-type containing 12B, mRNA (cDNA clone
MGC:198496 IMAGE:9054435), complete cds.
ACCESSION BC171781
VERSION BC171781.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4173)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4173)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 18 Row: O Column: 21.
FEATURES Location/Qualifiers
source 1..4173
/db_xref="H-InvDB:HIT000503512"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198496 IMAGE:9054435"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_313"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: CTCTCTCA"
gene 1..4173
/gene="ZC3H12B"
/gene_synonym="MCPIP2"
/db_xref="GeneID:340554"
/db_xref="HGNC:HGNC:17407"
CDS 101..2578
/gene="ZC3H12B"
/gene_synonym="MCPIP2"
/codon_start=1
/product="zinc finger CCCH-type containing 12B"
/protein_id="AAI71781.1"
/db_xref="GeneID:340554"
/db_xref="HGNC:HGNC:17407"
/translation="MEKSASKEEKQQPKQDSTEQGNADSEEWMSSESDPEQISLKSSD
NSKSCQPRDGQLKKKEMHSKPHRQLCRSPCLDRPSFSQSSILQDGKLDLEKEYQAKME
FALKLGYAEEQIQSVLNKLGPESLINDVLAELVRLGNKGDSEGQINLSLLVPRGPSSR
EIASPELSLEDEIDNSDNLRPVVIDGSNVAMSHGNKEEFSCRGIQLAVDWFLDKGHKD
ITVFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKL
AFDSDGIIVSNDNYRDLQVEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLEN
FLRKRPIVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSTVKT
MSEGTLAKCGTGMSSAKGEITSEVKRVAPKRQSDPSIRSVAMEPEEWLSIARKPEASS
VPSLVTALSVPTIPPPKSHAVGALNTRSASSPVPGSSHFPHQKASLEHMASMQYPPIL
VTNSHGTPISYAEQYPKFESMGDHGYYSMLGDFSKLNINSMHNREYYMAEVDRGVYAR
NPNLCSDSRVSHTRNDNYSSYNNVYLAVADTHPEGNLKLHRSASQNRLQPFPHGYHEA
LTRVQSYGPEDSKQGPHKQSVPHLALHAQHPSTGTRSSCPADYPMPPNIHPGATPQPG
RALVMTRMDSISDSRLYESNPVRQRRPPLCREQHASWDPLPCTTDSYGYHSYPLSNSL
MQPCYEPVMVRSVPEKMEQLWRNPWVGMCNDSREHMIPEHQYQTYKNLCNIFPSNIVL
AVMEKNPHTADAQQLAALIVAKLRAAR"
BASE COUNT 1187 a 992 c 927 g 1067 t
ORIGIN
1 catgtggatt ccaagcaggc taaaaagaaa aagaactgat tagacctcag acgacccact
61 aaacgggatg acggccacag ctgaggtaga gacaccaaaa atggagaaga gtgcctccaa
121 ggaagagaag cagcagccta agcaggacag cacagagcag ggcaatgctg attctgaaga
181 gtggatgagc tctgagagtg accctgaaca gataagcctt aagagtagcg acaacagcaa
241 gagctgccaa cctagggatg gtcagttgaa gaaaaaggag atgcactcca agccacaccg
301 ccagctctgt cgatcaccct gcctagatcg tccaagtttc tcccagagca gcattttaca
361 ggatggtaaa cttgacttgg agaaggaata ccaagctaag atggagtttg cgctaaagct
421 gggctatgca gaggaacaga ttcaatcagt gctaaacaag ctgggcccag aatcacttat
481 taatgatgta ttggcagagc ttgtcagact tgggaacaaa ggtgattcag aagggcagat
541 caacttgagt ctgttagtgc ctcgtgggcc cagctccaga gagattgcaa gccctgaatt
601 gtctcttgaa gatgaaatag ataacagtga caatttgagg ccagttgtca ttgatggaag
661 taatgtggca atgagccatg ggaataaaga agaattctcc tgcagaggaa tacaacttgc
721 tgtggattgg tttctagata aaggccataa agatattact gtatttgtgc ctgcatggag
781 aaaggagcaa tcccgccctg atgcaccaat tacagatcaa gatattctac gaaaactgga
841 gaaggaaaag attcttgtct tcacaccatc ccgaagagtc caaggcagga gggttgtctg
901 ctatgatgac cggttcatag tcaaactggc ttttgattct gatggcatca ttgtgtccaa
961 tgataactac cgagaccttc aagttgaaaa gccagaatgg aagaagttta tagaggagcg
1021 gttgctgatg tattcttttg tgaatgacaa atttatgcct ccagatgatc cattaggacg
1081 ccacggccca agccttgaaa atttcttaag aaagagaccc attgttcctg agcataagaa
1141 gcaaccatgt ccttatggca aaaaatgcac ctacggccac aagtgcaaat actaccatcc
1201 ggagcgggcc aaccaacccc agcgttcggt ggctgatgag ctccgcatca gtgccaaact
1261 gtccacagtg aaaactatga gtgaaggcac cctggccaag tgtggcacag ggatgtctag
1321 tgccaaaggt gagataacct cagaggtcaa acgtgtggcc cccaagcgcc aatcagatcc
1381 cagcatccgg tctgtggcta tggagcctga ggaatggctg tccattgccc gtaagcctga
1441 ggctagttct gtcccctcgc ttgtgactgc cctaagtgtt cccacaatcc caccccccaa
1501 aagccatgca gtgggtgcac tcaacacccg ttcggccagc agcccagtgc caggatcctc
1561 ccatttcccc caccagaagg cctctttgga gcatatggcc agcatgcagt atcctcccat
1621 cttggttacc aacagccatg ggacccctat tagctatgct gagcaatacc caaagtttga
1681 atccatgggg gaccatggct actattcaat gttaggtgac ttctccaaac tgaacatcaa
1741 cagcatgcat aaccgagagt attacatggc tgaagtagac cggggggtgt atgcccggaa
1801 tcctaacctc tgttctgaca gccgtgtgag ccataccagg aatgacaact attcctctta
1861 caacaacgtg tatttggctg tagctgatac ccatcctgaa ggcaatttga agctgcaccg
1921 ctcagcatcc cagaaccgac ttcagccttt tcctcatggt taccatgaag ccttaacacg
1981 agtgcagagc tatggcccag aggattctaa gcaaggcccc cacaaacagt cagtccccca
2041 cttagctctg catgcccagc acccatcaac tggaacacgt tccagctgtc ctgcagacta
2101 ccccatgcct cccaatatcc atcctggggc aaccccccag ccaggccgtg ccctggtgat
2161 gactcggatg gatagcattt ccgactcccg cctctatgag agcaaccccg tgaggcaaag
2221 acgacctccc ctgtgccggg aacagcatgc cagctgggac ccgctgccct gtacaactga
2281 ctcctatggc taccactcct atcccttgag taacagcctc atgcaaccat gttatgagcc
2341 agtcatggta cggagcgtgc ctgaaaagat ggagcagctt tggaggaatc cttgggttgg
2401 aatgtgcaat gattccaggg agcatatgat cccagaacac cagtatcaga cctacaagaa
2461 cctctgcaat attttccctt ctaacatcgt ccttgcagtg atggagaaga atccccacac
2521 agcagatgcc cagcaactgg cagccttgat tgttgctaag cttagggctg cacgttgata
2581 tgacatagta cttatttctt tatacaaata tgaatattaa tactaataat acactaatac
2641 aataattata gtaactaata atttgtgttg cgctttacaa gttagagtgt ttatatcatt
2701 taagcgctta acaaccctgt gaggtacgtc ttactaacat cctcttttat agagaaggaa
2761 ggtgaaggtc agtgaaatta agtggctagc cagggtcaca ctgctagcaa atgactaagt
2821 caagacacac acccaagtcc tctaaatcca agtcccatgc ccctttgcac tgcaccatgc
2881 aggtaatgga ggacaaaacc cagggggaga ggtctagatg taagaaatcc cagaggattc
2941 cattaccaga gttttccttt ttctcttttc gtttctttct ttctttcttt attttttttt
3001 tttgagacag aatctcactc tgttacacag gctggagtgc agtggcacta tctctgctca
3061 ctgcaacctc cacctccagg gttcaagtga ttctatggcc tcagcctccc aggtagctgg
3121 gattacaggc gtgcaccacc atgcccagct aatttttgta tttttagtag agacgtggtt
3181 tcaccgtgtt ggccaggctg gtctcaaact cctggcctca agtgatccgc ccaccttggc
3241 ctcctaaagt gctgggatta caggtgtgag ccactgcgcc cagcctacca gagttttcgt
3301 agtcacatat tctatattac aaagtatgga tgatatatcc aatttagaga gcaaaagcat
3361 caggatcaga tcatatgttg aattaacctt ttaggttttt tctaatagaa atatttaaag
3421 ctatttaaaa gtaaatgcat actttattgc atggatatct gatcactcaa tctatattaa
3481 tgaaactata gggtcacatt gaagcttcta gaactatatt ttaaagctat tattagcaat
3541 tatattgcat gtatgaatat atatatttgg tttgagatgt gtgtgtatct ctgtataacc
3601 ttttatatag tgataatgag agggtaggct ctacacagtc cttcgtctat agctgtatag
3661 gtcactaatc tgacttgatg attttaagtc acatttcata gttttaacta gttatgagag
3721 agaaattata tggcaatatt tgaacattgc tttcttaggc accagagcaa agcaactctg
3781 tttcctttgc acattttacc tgccaacatt tattaacagt tcttaccttc caagtctctt
3841 caccttagca aattagggat caggttgcag tcttctgcag agaaactgat ggttaagctc
3901 aagttccaag catagtatgt gtgtgctaca caagctcaga agagtttgac aaggaccagg
3961 ggacttacta ccacaatcca cttcccttat cccaggagag atggccaaac ccatgtggca
4021 ttaaatggtg aataaaaaag cttcactcaa ggagggacta ttggatgctc tttggacttc
4081 tgacctatgc agtattcaac atcattggat gaaatgtaat ggaggacagt gcacagccat
4141 gtatccactt tctcttcctg tccacccttt ggg
//