LOCUS BC171771 5925 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens schlafen family member 13, mRNA (cDNA clone MGC:198486
IMAGE:9054425), complete cds.
ACCESSION BC171771
VERSION BC171771.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5925)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: B Column: 14.
FEATURES Location/Qualifiers
source 1..5925
/db_xref="H-InvDB:HIT000503502"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:198486 IMAGE:9054425"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_363"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: GGTGCGTT"
gene 1..5925
/gene="SLFN13"
/gene_synonym="SLFN10"
/db_xref="GeneID:146857"
/db_xref="HGNC:HGNC:26481"
CDS 178..2871
/gene="SLFN13"
/gene_synonym="SLFN10"
/codon_start=1
/product="SLFN13 protein"
/protein_id="AAI71771.1"
/db_xref="GeneID:146857"
/db_xref="HGNC:HGNC:26481"
/translation="MEANHCSLGVYPSYPDLVIDVGEVTLGEENRKKLQKTQRDQERA
RVIRAACALLNSGGGVIQMEMANRDERPTEMGLDLEESLRKLIQYPYLQAFFETKQHG
RCFYIFVKSWSGDPFLKDGSFNSRICSLSSSLYCRSGTSVLHMNSRQAFDFLKTKERQ
SKYNLINEGSPPSKIMKAVYQNISESNPAYEVFQTDTIEYGEILSFPESPSIEFKQFS
TKHIQQYVENIIPEYISAFANTEGGYLFIGVDDKSRKVLGCAKEQVDPDSLKNVIARA
ISKLPIVHFCSSKPRVEYSTKIVEVFCGKELYGYLCVIKVKAFCCVVFSEAPKSWMVR
EKYIRPLTTEEWVEKMMDADPEFPPDFAEAFESQLSLSDSPSLCRPVYSKKGLEHKAD
LQQHLFPVPPGHLECTPESLWKELSLQHEGLKELIHKQMRPFSQGIVILSRSWAVDLN
LQEKPGVICDALLIAQNSTPILYTILREQDAEGQDYCTRTAFTLKQKLVNMGGYTGKV
CVRAKVLCLSPESSAEALEAAVSPMDYPASYSLAGTQHMEALLQSLVIVLLGFRSLLS
DQLGCEVLNLLTAQQYEIFSRSLRKNRELFVHGLPGSGKTIMAMKIMEKIRNVFHCEA
HRILYVCENQPLRNFISVRNICRAETRKTFLREKFEHIQHIVIDEAQNFRTEDGDWYR
KAKTITQREKDCPGVLWIFLDYFQTSHLGHSGLPPLSAQYPREELTRVVRNADEIAEY
IQQEMQLIIENPPINIPHGYLAILSEAKWVPGVPGNTKIIKNFTLEQIVTYVADTCRC
FFERGYSPKDVAVLVSTVTEVEQYQSKLLKAMRKKMVVQLSDACDMLGVHIVLDSVRR
FSGLERSIVFGIHPRTADPAILPNILICLASRAKQHLYIFL"
BASE COUNT 1707 a 1204 c 1304 g 1710 t
ORIGIN
1 gtggaagaag acagcaggcg gtgggcattc actgtgctgg tgggaagtct ggttacatta
61 agaaaggaat tctagcaaag ttattctgta aatacaacag aatcagttgc ttttgttaaa
121 tatattggta cttcaggact gattttggtg taagaagaca gcaggtgcaa gttcaacatg
181 gaggcaaatc actgctccct gggtgtgtat ccatcttacc cagacctggt catcgatgtc
241 ggagaagtga ctctgggaga agaaaacaga aaaaagctac agaaaactca gagagaccaa
301 gagagggcga gagttatacg ggccgcgtgt gctttattaa actcaggagg aggagtgatt
361 cagatggaaa tggccaacag ggatgagcgt cccacagaga tgggactgga tttagaagaa
421 tccttgagaa agcttattca gtatccatat ttgcaggctt tctttgagac taagcaacac
481 ggaaggtgtt tttatatttt tgttaaatct tggagtggtg atcctttcct taaagatggt
541 tctttcaatt cccgcatttg cagccttagt tcttcattat actgtagatc tggcacctct
601 gtgcttcaca tgaattcaag acaggcattc gatttcctga agaccaagga aagacagtcc
661 aaatataatc tgattaatga agggtctcca cctagtaaaa ttatgaaagc tgtataccag
721 aacatatctg agtcaaatcc tgcatatgaa gttttccaaa ctgacactat tgaatatggt
781 gaaatcctat cttttcctga gtctccatcc atagagttta aacagttctc tacaaaacat
841 atccaacaat atgtagaaaa tataattcca gagtacatct ctgcatttgc aaacactgag
901 ggaggctatc tttttattgg agtggatgat aagagtagga aagtcctggg atgtgccaaa
961 gaacaggttg accctgactc tttgaaaaat gtaattgcaa gagcaatttc taagttgccc
1021 attgttcatt tttgctcttc aaaacctcgg gtagagtaca gcaccaaaat cgtagaagtg
1081 ttttgtggga aagagttgta tggctatctc tgtgtgatta aagtgaaggc attctgttgt
1141 gtggtgttct cggaagctcc caagtcatgg atggtgaggg agaagtacat ccgccccttg
1201 acaactgagg aatgggtaga gaaaatgatg gacgcagatc cagagtttcc tccagacttt
1261 gctgaggcct ttgagtctca gttgagtcta tctgacagtc cttcactttg cagaccagtg
1321 tattctaaga aaggtctgga acacaaagct gatctacaac aacatttatt tccagttcca
1381 ccaggacatt tggaatgtac tccagagtcc ctctggaagg agctgtcttt acagcatgaa
1441 ggactaaagg agttaataca caagcaaatg cgacctttct cccagggaat tgtgatcctc
1501 tctagaagct gggctgtgga cctgaacttg caggagaagc caggagtcat ctgtgatgct
1561 ctgctgatag cacagaacag cacccccatt ctctacacca ttctcaggga gcaggatgca
1621 gagggccagg actactgcac tcgcaccgcc tttactttga agcagaagct agtgaacatg
1681 gggggctaca ccgggaaggt gtgtgtcagg gccaaggtcc tctgcctgag tcctgagagc
1741 agcgcagagg ccttggaggc tgcagtgtct ccgatggatt accctgcgtc ctatagcctt
1801 gcaggcaccc agcacatgga agccctgctg cagtccctcg tgattgtctt actcggcttc
1861 aggtctctct tgagtgacca gctcggctgt gaggttttaa atctgctcac agcccagcag
1921 tatgagatat tctccagaag cctccgcaag aacagagagt tgtttgtcca cggcttacct
1981 ggctcaggga agaccatcat ggccatgaag atcatggaga agatcaggaa tgtgtttcac
2041 tgtgaggcac acagaattct ctacgtttgt gaaaaccagc ctctgaggaa ctttatcagt
2101 gttagaaata tctgccgagc agagacccgg aaaactttcc taagagaaaa atttgaacac
2161 attcaacaca tcgtcattga cgaagctcag aatttccgta ctgaagatgg ggactggtat
2221 aggaaggcaa aaaccatcac tcagagagaa aaggattgtc caggagttct ctggatcttt
2281 ctggactact ttcagaccag tcacttgggt cacagtggcc ttccccctct ctcagcacag
2341 tatccaagag aagagctcac cagagtagtt cgcaatgcag atgaaatagc cgagtacata
2401 caacaagaaa tgcaactaat tatagaaaat cctccaatta atatccccca tgggtatctg
2461 gcaattctca gtgaagctaa atgggttcca ggtgttccag gcaacacaaa gattattaaa
2521 aactttactt tggagcaaat agtgacctat gtggcagaca cctgcaggtg cttctttgaa
2581 aggggctatt ctccaaagga tgttgctgtg cttgtcagca ccgtgacaga agtggagcag
2641 tatcagtcta agctcttgaa agcaatgagg aagaaaatgg tggtgcagct cagtgatgca
2701 tgtgatatgt tgggtgtgca cattgtgttg gacagtgtcc ggcgattctc aggcctggaa
2761 aggagcatag tgtttgggat ccatccaagg acagctgacc cagctatctt acccaatatt
2821 ctgatctgtc tggcttccag ggcaaaacag cacctatata tttttctgtg aagtgactat
2881 taggaagaac tccaaaccaa aatactgtgt aaatgtctat gggtgacagt ctgctgatgg
2941 tagaaacctt tctttttagt tcacaagtca gttagagatt tggacagagc tgacacaaag
3001 agtttggagc tcccccattt ctggctctcc tttcaggggt tcctccccca actcttttca
3061 gcagtggtgg ctgcccccca ttctgacccc tgactcttgc agccagaaag atggtggttt
3121 tctaaaggaa ctttagctgt gctgcacaat gcagacctgt gtcttgctct ctgggtaaaa
3181 gccataaaaa taagaaactc agcctgtggc ctttcttcca aggctggagt tctcgagttc
3241 tcttttatgt gacttcgtgt agtttgttgc tttaaaaaat ttgtccagaa ttgttttctg
3301 cagaagcatg gtctgttagg agcttacagg ccataggaga agcagttgtt tcctgaattt
3361 atctttgctg tattcattta gggcttggga gagtcccaag ataattcagt cactgtcaga
3421 ttaatcattt cggcagaaca aacaatattg ttatgattat ttaatcctta aaattgtgat
3481 ctccagagtt tgttatcaga ataacccaga ccaaggctta attgtaatag tgaacattaa
3541 tggtaccttt acagagaaat tataggccaa gagaaaatgc tggctttcag tagaagttaa
3601 tattagaaac ccaaatctgg ttctgaaagt gtgtatcaga tgtacggtga acaaacttgg
3661 gaaagatttt ctttaaaaat caatgagcgt tggccaggca cggtggctca cacctgtaat
3721 cccagctgtt tgggaggctg aggcaggtgg atcacctgag gtcaggagtt caagaccagc
3781 ctggccaaca tggagaaacc ccatctctac taaaaataca aaaattagca gggcatggtg
3841 gtgcatgcct gtatcccagc tacttgggag gctgaagcat gagaatcact tgaatcctgg
3901 aggcagaggt tgcagtgagc tgagatcatg tcactgtact ccagcctggg caacagagtg
3961 agactgtctc aaaaagaaga agaagaagaa aaaaaatgca gtgagtttat gttgttacat
4021 tgtaacatct cagcgtagct gtatgcatta ctctatagca tacctactta agttttatgt
4081 cattcttgaa ctgtgatttt tttttctatt tgctttcata gtttggtggg ccattgttat
4141 ggactgaatg tttgtgtccc atcctcaccc ctaaattccc atgttgaagc cccaaccttc
4201 actgtggagc tggggctgct aaggaagtaa ttaaggttac acgaagtcac agtggagaat
4261 ctgatctgct aagactggtg tccttatagg gagagacccc agagagcttg ttcccttcct
4321 ccctgtgcac acaaacaaga gggcatggga gcacacagag agatggcagc cacctacaag
4381 ccaagaggag aagcctcaca atgaaccccc cccccaccct gctggcacct atgtcttcga
4441 cttccagccc ccagactgtg agaaataaat ttctgttggt tcagccatcc agtctctagt
4501 gttttgttat tgcagcctga gaacacagct gtatgatcat tcatcaaact aaaaacactg
4561 atacttaaca atgctaatgc aattacttat ttgcttttca gtctctacaa aacattctaa
4621 aacactaatc taaatactaa caataaaata tttgcataac taatgaaaat taagaaacca
4681 catgcccaat attccattta taagtaatcc tatttggctg atttccctcc atattgtaag
4741 ttttgaactt ttctgccagt ctttctccta tttgtgttaa ctcatggaat tccagttgtc
4801 tagccttgaa attgtaggct cttctaactt gagcaaaatc tgacagatca gcaaaataag
4861 gagaaaaata tttcttcttt ctttctggct gcattaaatg agatacagct cagcaccaaa
4921 aagctatctt tgtaaatgtt cttagtaaac tccctggtct ttggagttat ttcagccttt
4981 gagagtaatt ctttaaaagt ctaattctga ctggttgaat ctctctatat gatttattgc
5041 cctagtaata tttgaaacag tatcatattt taaaatatat aaatatttat gaatttttgt
5101 tcagcccaaa gaggattact gatgctttct tctttttcca tatgatgagg aaatgtttag
5161 cttatatatt tattgcattt ctgttttaaa taaaaaattg agagtttgtg tttcattaaa
5221 ctgaaaaaaa aggttctgta aaataaatga ttaaatggag gaaaaggaga agactgaggc
5281 cagcaactcc atgatacagc caaaaatgag ccagtaaaag attaagcaag attaactgta
5341 aatttttttt tttttttttt aaagagaaaa ggtctcactg tgtttcccag gctggagggt
5401 agtggtgtga tcatagttca ctggagccct gaactcctgg gctcgggtga tcctcttgcc
5461 ttagcctccc attgctggga ttataggcat gagccactgt gtcaggctta attgggtttt
5521 gatgggtacc tgcctatctc tgtaatttgg ctctagtcat ataggacctg cttcattaaa
5581 gatctgaaaa tctatccagc cattgtaaaa tgaaacaaaa tgttttgaaa atttaaatta
5641 gccttttatt ttagttcaga catatagaaa agttgcaagc atagtacaga aagttcctat
5701 ataccccact tagtgccctc ctttttaaaa tttttttaaa cctagcttat ttcctttaag
5761 atttctgaga attccaggaa tgctcacaga tctgtccttg tagtctcctg ccacttcttg
5821 ctatggagtg ctgtaccaag gtctctgcta gtttctagtt ggcttgacat aatgactttc
5881 ctaaacttct tctgctctga atctcaagca tggaaagcgg tcaca
//