LOCUS BC171727 941 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens troponin T type 3 (skeletal, fast), mRNA (cDNA clone
MGC:177063 IMAGE:9052046), complete cds.
ACCESSION BC171727
VERSION BC171727.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 941)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 941)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: B Column: 14.
FEATURES Location/Qualifiers
source 1..941
/db_xref="H-InvDB:HIT000503458"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177063 IMAGE:9052046"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_298"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TTttgAGC"
gene 1..941
/gene="TNNT3"
/gene_synonym="AMCD2B"
/gene_synonym="DA2B"
/gene_synonym="FSSV"
/db_xref="GeneID:7140"
/db_xref="HGNC:HGNC:11950"
/db_xref="MIM:600692"
CDS 97..867
/gene="TNNT3"
/gene_synonym="AMCD2B"
/gene_synonym="DA2B"
/gene_synonym="FSSV"
/codon_start=1
/product="TNNT3 protein"
/protein_id="AAI71727.1"
/db_xref="GeneID:7140"
/db_xref="HGNC:HGNC:11950"
/db_xref="MIM:600692"
/translation="MSDEEVEQVEEQYEEEEEAQEEAAEVHEEVHEPEEKPRPKLTAP
KIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERA
EQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKAD
QKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEK
LKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK"
BASE COUNT 289 a 244 c 285 g 123 t
ORIGIN
1 cccccatcct acacccaggc agctcgtaac tctctttcca tcctctctct ctctctctct
61 ctgaatctct ctctgcagaa accacccacc ttcaccatgt ctgacgagga agttgaacag
121 gtggaggagc agtacgaaga agaagaggaa gcccaggagg aagctgcaga agtccatgag
181 gaagttcatg aaccagagga gaaaccgaga cccaaactca ctgctcctaa gatcccagaa
241 ggggagaaag tggacttcga tgacatccag aagaagcgtc agaacaaaga cctaatggag
301 ctccaggccc tcatcgacag ccactttgaa gcccggaaga aggaggagga ggagctggtc
361 gctctcaaag agagaatcga gaagcgccgt gcagagagag cggagcagca gaggattcgt
421 gcagagaagg agagggagcg ccagaacaga ctggcggagg aaaaggccag aagggaggag
481 gaggatgcca agaggagggc agaggacgac ctgaagaaga agaaagctct gtcttccatg
541 ggagccaact acagcagcta cctggccaag gctgaccaga agagaggcaa gaagcagaca
601 gcccgggaaa tgaagaagaa gattctggct gagagacgca agccgctcaa catcgatcac
661 cttggtgaag acaaactgag ggacaaggcc aaggagctct gggagaccct gcaccagctg
721 gagattgaca agttcgagtt tggggagaag ctgaaacgcc agaaatatga catcaccacg
781 ctcaggagcc gcattgacca ggcccagaag cacagcaaga aggctgggac cccagccaag
841 ggcaaagtcg gcgggcgctg gaagtagaga ggccagaaag gcccctcgag gcagagaccc
901 tccgccctct tgcacaccag ggccgctcgt gggactccac a
//