LOCUS BC167431 7971 bp mRNA linear HUM 19-JUN-2008 DEFINITION Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone MGC:166905 IMAGE:8860107), complete cds. ACCESSION BC167431 VERSION BC167431.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 7971) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 7971) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-JUN-2008) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Kazusa DNA Research Inst. cDNA Library Preparation: Kazusa DNA Research Institute cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCF Plate: 10 Row: c Column: 6. FEATURES Location/Qualifiers source 1..7971 /db_xref="H-InvDB:HIT000503451" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:166905 IMAGE:8860107" /tissue_type="Clones donated by Kazusa DNA Research Inst." /clone_lib="Kazusa-KIAA-pBluescriptIISK+" /lab_host="DH5alpha T1-resistant" /note="Vector: pBluescript II SK+" gene 1..7971 /gene="NCOR1" /gene_synonym="hCIT529I10" /gene_synonym="hN-CoR" /gene_synonym="N-CoR" /gene_synonym="TRAC1" /db_xref="GeneID:9611" /db_xref="HGNC:HGNC:7672" /db_xref="MIM:600849" CDS 46..7059 /gene="NCOR1" /gene_synonym="hCIT529I10" /gene_synonym="hN-CoR" /gene_synonym="N-CoR" /gene_synonym="TRAC1" /codon_start=1 /product="NCOR1 protein" /protein_id="AAI67431.1" /db_xref="GeneID:9611" /db_xref="HGNC:HGNC:7672" /db_xref="MIM:600849" /translation="MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYR SSHLEVSQASQLLQQQQQQQLRRRPSLLSEFHPGSDRPQERRTSYEPFHPGPSPVDHD SLESKRPRLEQVSDSHFQRVSAAVLPLVHPLPEGLRASADAKKDPAFGGKHEAPSSPI SGQPCGDDQNASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPE PEKPVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYH ENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAK ESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQEN NEKQMRQLSVIPPMMFDAEQRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKD KFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQIARP SQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKENTKEKDKIDGTAEETEEREQ ATPRGRKTANSQGRRKGRITRSMTNEAAAASAAAAAATEEPPPPLPPPPEPISTEPVE TSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH KQKTSRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEGAENSSDTESAPS PSPVEAVKPSEDSPENATSRGNTEPAVELEPTTETAPSTSPSLAVPSTKPAEDESVET QVNDSISAETAEQMDVDQQEHSAEEGSVCDPPPATKADSVDVEVRVPENHASKVEGDN TKERDLDRASEKVEPRDEDLVVAQQINAQRPEPQSDNDSSATCSADEDVDGEPERQRM FPMDSKPSLLNPTGSILVSSPLKPNPLDLPQLQHRAAVIPPMVSCTPCNIPIGTPVSG YALYQRHIKAMHESALLEEQRQRQEQIDLECRSSTSPCGTSKSPNREWEVLQPAPHQV ITNLPEGVRLPTTRPTRPPPPLIPSSKTTVASEKPSFIMGGSISQGTPGTYLTSHNQA SYTQETPKPSVGSISLGLPRQQESAKSATLPYIKQEEFSPRSQNSQPEGLLVRAQHEG VVRGTAGAIQEGSITRGTPTSKISVESIPSLRGSITQGTPALPQTGIPTEALVKGSIS RMPIEDSSPEKGREEAASKGHVIYEGKSGHILSYDNIKNAREGTRSPRTAHEISLKRS YESVEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHSDLKERTVLSGSIMQGTPRAT TESFEDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGRSIHEIPRQDILTQ ESRKTPEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIKHNVKSLITGPSKLSRGMPPL EIVPENIKVVERGKYEDVKAGETVRSRHTSVVSSGPSVLRSTLHEAPKAQLSPGIYDD TSARRTPVSYQNTMSRGSPMMNRTSDVTISSNKSTNHERKSTLTPTQRESIPAKSPVP GVDPVVSHSPFDPHHRGSTAGEVYRSHLPTHLDPAMPFHRALDPAAAAYLFQRQLSPT PGYPSQYQLYAMENTRQTILNDYITSQQMQVNLRPDVARGLSPREQPLGLPYPATRGI IDLTNMPPTILVPHPGGTSTPPMDRITYIPGTQITFPPRPYNSASMSPGHPTHLAAAA SAEREREREREKERERERIAAASSDLYLRPGSEQPGRPGSHGYVRSPSPSVRTQETML QQRPSVFQGTNGTSVITPLDPTAQLRIMPLPAGGPSISQGLPASRYNTAADALAALVD AAASAPQMDVSKTKEISSHRYETPSDAIEVISPASSPAPPQEKLQTYQPEVVKANQAE NDPTRQYEGPLHHYRPQQESPSPQQQLPPSSQAEGMGQVPRTHRLITLADHICQIITQ DFARNQVSSQTPQQPPTSTFQNSPSALVSTPVRTKTSNRYSPESQAQSVHHQRPGSRV SPENLVDKSRGSRPGKSPERSHVSSEPYEPISPPQVPVVHEKQDSLLLLSQRGAEPAE QRNDARSPGSISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMAAAQPGTEI FNLPAVTTSGSVSSRGHSFADPASNLGLEDIIRKALMGSFDDKVEDHGVVMSQPMGVV PGTANTSVVTSGETRREEGDPSPHSGGVCKPKLISKSNSRKSKSPIPGQGYLGTERPS SVSSVHSEGDYHRQTPGWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTPIACAPSAVN QAAPHQQNRIWEREPAPLLSAQYETLSDSDD" BASE COUNT 2456 a 1912 c 1826 g 1777 t ORIGIN 1 tattggcatt gatctcacag tctggtgagg acttctttac tgataatgtc aagttcaggt 61 tatcctccca accaaggagc attcagcaca gaacaaagtc gttatcctcc tcactctgtc 121 cagtatacat ttcccaacac ccgccaccag caggagttcg cagtccctga ttatcgttcc 181 tctcatcttg aagtgagtca ggcatcacag cttttgcagc aacagcagca gcaacagctt 241 cgaaggcgac cttccttgct ttcagaattt cacccaggtt ctgacaggcc tcaagaaagg 301 agaactagtt atgaaccgtt tcatccaggc ccatccccag tggatcatga ttcactggaa 361 tcgaagcgac cacgtctgga acaggtttct gattctcatt ttcagcgtgt cagtgctgcg 421 gttttgcctt tagtgcaccc gctgccagaa gggctgaggg cttctgcaga tgctaagaag 481 gatccagcat tcggaggcaa acatgaagct ccatcctctc caatttcggg gcaaccatgt 541 ggagatgatc aaaatgcttc accttcaaaa ctctcaaagg aagagttaat acagagtatg 601 gatcgtgtag atcgagaaat tgcaaaagta gaacagcaga tccttaaact gaaaaagaaa 661 caacaacagc ttgaagaaga ggcagctaaa cctcctgagc ctgagaagcc cgtgtcccct 721 cctcctgtgg agcagaaaca ccgcagtatt gtccaaatta tttatgatga gaatcggaag 781 aaagcagaag aagctcataa aatttttgaa ggtcttggcc caaaagttga actgccactg 841 tataaccagc catcagatac caaggtgtac catgagaaca tcaagacaaa ccaggtgatg 901 aggaaaaaac tcattttatt ttttaaaaga agaaatcatg caagaaaaca aagggaacaa 961 aaaatctgcc agcgttatga tcagctcatg gaggcatggg agaaaaaagt ggacagaata 1021 gaaaataatc ctcggaggaa agctaaagaa agcaaaacaa gggaatacta tgaaaagcag 1081 tttccagaaa ttcgaaaaca aagagaacag caagaaagat ttcagcgagt tgggcagagg 1141 ggagctggtc tttcagccac cattgctagg agtgagcatg agatttctga aattattgat 1201 gggctctctg agcaggagaa taatgagaaa caaatgcggc agctctctgt gattccacct 1261 atgatgtttg atgcagaaca aagacgagtc aagttcatta acatgaatgg gcttatggag 1321 gaccctatga aagtgtataa agataggcag tttatgaatg tttggactga ccatgaaaag 1381 gagatcttta aggacaagtt tatccagcat ccaaaaaact ttggactaat tgcatcatac 1441 ttggagagga agagtgttcc tgattgtgtt ttgtattact atttaaccaa gaaaaatgag 1501 aattataaag ccctcgtcag aaggaattat gggaaacgca gaggcagaaa ccagcaaatt 1561 gctcgaccct cgcaagaaga aaaagtagaa gaaaaagaag aggataaagc agaaaaaaca 1621 gaaaaaaaag aagaagaaaa gaaagatgaa gaggaaaaag atgaaaaaga agactccaaa 1681 gaaaatacca aggaaaagga caagatagat ggtacagcag aagaaactga ggaaagagag 1741 caagccacac cccgggggcg aaagactgcc aacagtcagg gccgccgtaa gggccggatc 1801 accaggtcca tgacaaacga agctgcagct gccagtgctg cagccgcagc ggctactgaa 1861 gagcccccac cacctctgcc accgccacca gaacccattt ctacagagcc tgtggagacc 1921 tctcgatgga cagaagaaga aatggaagtt gctaaaaaag gtctagtaga acatggtcgt 1981 aactgggcag caattgctaa aatggtggga acgaaaagtg aagctcaatg taaaaacttc 2041 tattttaact ataaaaggcg acacaatctt gacaacctct tacagcagca taaacagaaa 2101 acttcacgaa aacctcgtga agagcgagat gtgtctcaat gtgaaagtgt cgcttccact 2161 gtttctgctc aggaggatga agatattgaa gcctccaatg aagaagaaaa tccagaagac 2221 agcgaaggtg cagaaaatag ttctgataca gaaagtgctc cttctccttc accagttgaa 2281 gctgtcaagc ccagcgagga cagtcctgaa aatgctactt ctcgaggaaa cacagaacct 2341 gcggttgagc ttgagcccac cacggaaact gcacccagta catctccctc cttagcagtt 2401 ccaagtacaa aaccagctga agatgaaagt gtggagaccc aggtgaatga cagcatcagt 2461 gctgagacag cagagcagat ggatgtagat cagcaggagc acagtgctga agagggttct 2521 gtttgtgatc ccccacccgc taccaaagct gactctgtgg acgttgaagt gagggtgcca 2581 gaaaaccatg catctaaagt tgaaggtgat aataccaaag aaagagactt ggatagagcc 2641 agtgagaagg tggaacctag agatgaagat ttggtggtag ctcagcaaat aaatgcccaa 2701 aggcccgagc cccagtcaga caatgattcc agtgccacgt gcagcgctga tgaggatgtg 2761 gatggagagc cagagaggca gagaatgttt cctatggact caaagccttc actgttaaac 2821 cccactggat ctatactcgt ctcatctccg ttaaaaccaa atccactgga tctgccacag 2881 cttcagcatc gagctgctgt tatcccacca atggtatcct gcaccccatg taacatacca 2941 attggaaccc cagtgagcgg ctatgctctc taccagcgac acattaaagc aatgcatgag 3001 tcagcactcc tggaggagca gcggcagaga caagaacaga tagatttgga atgtagaagt 3061 tctacaagtc catgtggcac atccaagagt ccaaacagag agtgggaagt ccttcagcct 3121 gctccacatc aagtgataac taatctccct gaaggcgttc ggcttccgac aactcgacca 3181 accaggccac cgccccctct catcccgtca tccaaaacca cagtggcttc agaaaaacca 3241 tcttttataa tgggaggctc catctcacag ggaacaccag gcacttattt gacttctcat 3301 aatcaggctt cctacactca agaaacaccc aagccgtcag tgggatctat ctctcttgga 3361 ctgccacggc aacaggaatc tgccaaatca gctactttgc cctacatcaa gcaggaagaa 3421 ttttctcccc gaagccaaaa ctcacaacct gagggtctgt tggtcagggc ccaacatgaa 3481 ggtgtagtca gaggtaccgc aggagccata caagaaggaa gtataactcg gggaactcca 3541 accagcaaaa tttcagtgga gagcattcca tccctacggg gctctatcac tcagggcacc 3601 ccggctctgc cccagactgg cataccaaca gaggctttgg tgaaggggtc catttcgaga 3661 atgcccattg aagacagcag tcctgagaaa ggcagagagg aagctgcatc caaaggccat 3721 gttatttatg aaggcaaaag tggacatatc ttgtcatatg ataatattaa gaatgcccga 3781 gaagggacta ggagtccaag aacagctcat gaaatcagtt taaagagaag ctatgaatca 3841 gtggaaggaa atataaagca agggatgtca atgagggagt ctcctgtatc agcaccgtta 3901 gaggggctga tatgccgagc attacccagg gggagtcctc attctgacct caaagaaagg 3961 actgtattgt ctggctccat aatgcagggg acaccaagag caacaactga aagctttgaa 4021 gatggcctta aatatcccaa acaaattaaa agggaaagtc ctcccatacg agcatttgaa 4081 ggtgccatta ccaaaggaaa accatatgat ggcatcacca ccatcaaaga aatggggcgt 4141 tccattcatg agattccaag gcaagatatt ttaactcagg aaagtcggaa aactccagaa 4201 gtggtccaga gcacacggcc gataattgag ggttccattt cccagggcac accaataaag 4261 tttgacaaca actcaggtca atctgccatc aaacacaatg tcaaatcctt aatcacgggg 4321 cctagcaaac tatcccgtgg aatgcctccg ctggaaattg tgccagagaa cataaaagtg 4381 gtagaacggg gaaaatatga ggatgtgaaa gcaggcgaga ccgtgcgttc ccggcacacg 4441 tcagtggtaa gctctggccc ctccgttctt aggtccacac tgcatgaagc tcccaaagca 4501 caactgagcc ctgggattta tgatgacacc agtgcacgga ggacccctgt gagttatcaa 4561 aacaccatgt ccagaggctc acccatgatg aacagaactt ctgatgttac aatttcttct 4621 aacaagtcta ccaatcatga aaggaaatcg acactgaccc ctacccagag ggaaagtatc 4681 ccagcgaagt ctccagtgcc tggggtggac cctgtcgtga gccacagtcc gtttgatccc 4741 catcacagag gcagcactgc aggcgaggtt tatcggagcc acctgcccac gcacttggat 4801 ccagccatgc cttttcacag ggctttggat cctgcagcgg ctgcttacct gtttcagaga 4861 cagctttcac caactccagg ttacccaagt cagtatcagc tttacgcaat ggagaacaca 4921 agacagacaa tcttaaatga ttacattacc tcacaacaga tgcaagtgaa cttgcgtcca 4981 gatgtggcca gaggactctc cccaagagag cagccactgg gtctcccata cccagcaacg 5041 agaggaatca ttgacctgac caatatgcct ccaacaattt tagtgcctca tccaggggga 5101 acaagcactc ctcccatgga cagaatcact tatattcctg gtacacagat tactttccct 5161 cccaggccgt acaactctgc ttccatgtct ccaggacacc caacacacct tgcagctgct 5221 gcaagtgctg agagggaacg ggaacgggag cgggagaagg agcgggagcg ggaacggatt 5281 gctgcagctt cctccgacct ctacctgcgg ccaggctcag aacagcctgg ccgacctggc 5341 agtcatggat atgttcgctc cccttcccct tcagtaagaa ctcaggagac catgttgcaa 5401 cagagaccca gtgttttcca aggaaccaat ggaaccagtg taatcacacc tttggatcca 5461 actgctcagc tacgaatcat gccactgcct gctgggggcc cttcaataag ccaaggcctg 5521 ccagcctccc gttacaacac tgctgcggat gccctggctg ctcttgtgga tgctgcagct 5581 tctgcacccc agatggatgt gtccaaaaca aaagagatat cttctcacag gtatgaaaca 5641 cctagcgatg ctattgaggt gataagtcct gccagctcac ctgcgccacc ccaggagaaa 5701 ctgcagacct atcagccaga ggttgttaag gcaaatcaag cggaaaatga tcctaccaga 5761 caatatgaag gaccattaca tcactatcga ccacagcagg aatcaccatc tccccaacaa 5821 cagctgcccc cttcttcaca ggcagaggga atggggcaag tgcccaggac ccatcggctg 5881 atcacacttg ctgatcacat ctgtcaaatt atcacacaag attttgctag aaatcaagtt 5941 tcctcgcaga ctccccagca gcctcctact tctacattcc agaactcacc ttctgctttg 6001 gtatctacac ctgtgaggac taaaacatca aaccgttaca gcccagaatc ccaggctcag 6061 tctgtccatc atcaaagacc aggttcaagg gtctctccag aaaatcttgt ggacaaatcc 6121 aggggaagta ggcctggaaa atccccagag aggagtcacg tctcttcgga gccctacgag 6181 cccatctccc caccccaggt tccggttgtg catgagaaac aggacagctt gctgctcttg 6241 tctcagaggg gcgcagagcc tgcagagcag aggaatgatg cccgctcacc agggagtata 6301 agctacttgc cttcattctt caccaagctt gaaaatacat cacccatggt taaatcaaag 6361 aagcaggaga tttttcgtaa gttgaactcc tctggtggag gtgactctga tatggcagct 6421 gctcagccag gaactgagat ctttaatctg ccagcagtta ctacgtcagg ctcagttagc 6481 tctagaggcc attcttttgc tgatcctgcc agtaatcttg ggctggaaga cattatcagg 6541 aaggctctca tgggaagctt tgatgacaaa gttgaggatc atggagttgt catgtcccag 6601 cctatgggag tagtgcctgg tactgccaac acctcagttg tgaccagtgg tgagacacga 6661 agagaggaag gggacccatc acctcattca ggaggagttt gcaaaccaaa gctgatcagc 6721 aagtcaaaca gcaggaaatc taagtctcct atacctgggc aaggctactt aggaacggaa 6781 cggccctctt cagtctcctc tgtacattca gaaggggatt accataggca gacgccaggg 6841 tgggcctggg aagacaggcc ctcttcaaca ggctcaactc agtttcctta taaccctctg 6901 actatgcgga tgctcagcag tactccacca acaccgattg catgtgctcc ctctgcggtg 6961 aaccaagcag ctcctcacca acagaacagg atctgggagc gagagcctgc cccactgctc 7021 tcagcacagt acgagaccct gtcggatagt gatgactgaa ctgcacaaag tgaggggaac 7081 agggtgcagg agagggatct ctagtttttg tggtttaatt tttagtagca ggtcaaaaac 7141 ctgccctcct gtgacttatt ccctgagact tttcaggaga gccagcccac agatgatgaa 7201 gaaatgatgg aagttcattt ggagagtcaa atgggaaaaa aacaaacaaa aaactgcctt 7261 tgatacaggc aattcagtgg actataataa tagtggaggg ttgagatgta gagtttttaa 7321 aaagtgaaca gttgctgttc ttacatctgt aaagaaaacc ataatgtctt taaatcactc 7381 ttctgtaaat agatgacctt tttgcagtgt atatcccctt gctgtagtat ctggtgtact 7441 tatgttcaaa tcagcgcatc aactttgggg gtgattttta aaaatctttt tgtctatcta 7501 tctttttaac cctagccttc taaacaacct catacagccc agttacataa tgttggctgt 7561 cacgggcatt gtacttttat ctgatattgt ttcctctaaa ttcagctttc cagtgatgtt 7621 taaaatcttg tgaaaatgtt tagattttta acacagaccc tgtcataaaa tctgtacatt 7681 agggtcaaaa ggtaaaagta acaaattctg ccatattgta aatttccagt gcaggcttta 7741 attttttttt ttcattagta gcactgaaaa aatattactg catgggtatg ttctagttca 7801 gtttataaag ttttaaaggc ttatttgagg catacctcac tgttacgcac actggtaatt 7861 taaccatgcc cctaagtatt ccttttctcc tgcatttgat gcagcccaac aaagcttttg 7921 ttttgaaata aatttgacta ccctgtccat aaaaaaaaaa aaaaaaaaaa a //