LOCUS BC157879 2890 bp mRNA linear HUM 30-JUN-2008
DEFINITION Homo sapiens schlafen family member 14, mRNA (cDNA clone MGC:189771
IMAGE:9057095), complete cds.
ACCESSION BC157879
VERSION BC157879.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-DEC-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: D Column: 2.
FEATURES Location/Qualifiers
source 1..2890
/db_xref="H-InvDB:HIT000503434"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:189771 IMAGE:9057095"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCTGGAGC"
gene 1..2890
/gene="SLFN14"
/db_xref="GeneID:342618"
/db_xref="HGNC:HGNC:32689"
CDS 38..2776
/gene="SLFN14"
/codon_start=1
/product="schlafen family member 14"
/protein_id="AAI57880.1"
/db_xref="GeneID:342618"
/db_xref="HGNC:HGNC:32689"
/translation="MESLKTDTEMPYPEVIVDVGRVIFGEENRKKMTNSCLKRSENSR
IIRAICALLNSGGGVIKAEIDDKTYSYQCHGLGQDLETSFQKLLPSGSQKYLDYMQQG
HNLLIFVKSWSPDVFSLPLRICSLRSNLYRRDVTSAINLSASSALELLREKGFRAQRG
RPRVKKLHPQQVLNRCIQEEEDMRILASEFFKKDKLMYKEKLNFTESTHVEFKRFTTK
KVIPRIKEMLPHYVSAFANTQGGYVLIGVDDKSKEVVGCKWEKVNPDLLKKEIENCIE
KLPTFHFCCEKPKVNFTTKILNVYQKDVLDGYVCVIQVEPFCCVVFAEAPDSWIMKDN
SVTRLTAEQWVVMMLDTQSAPSSLVTDYNSCLISSASSARKSPGYPIKVHEFKEALQR
HLFPVTQEEVQFKPESLCKKLFSDHKELEGLMKTLIHPCSQGIVIFSRSWAGDVGFRK
EQNVLCDALLIAVNSPVVLYTILIDPNWPGGLEYARNTAHQLKQKLQTVGGYTGKVCI
IPRLIHLSSTQSRPGEIPLRYPRSYRLADEEEMEDLLQALVVVSLSSRSLLSDQMGCE
FFNLLIMEQSQLLSESLQKTRELFIYCFPGVRKTALAIKIMEKIKDLFHCKPKEILYV
CESDSLKDFVTQQTTCQAVTRKTFMQGEFLKIKHIVMDETENFCSKYGNWYMKAKNIT
HPKAKGTGSENLHHGILWLFLDPFQIHHADVNGLPPPSAQFPRKTITSGIHCALEIAK
VMKEEMKRIKENPPSNMSPDTLALFSETAYEEATCAQALPGVCETKTNLTTEQIANYV
ARKCHSLFQCGYLPKDIAILCRRGEDRGRYRLALLKAMELIETHRPSEVVFSPATGVW
GSHIVLDSIQQFSGLERTVVFGLSPECDQSEEFHKLCFASRAIKHLYLLYEKRAAY"
BASE COUNT 870 a 593 c 693 g 734 t
ORIGIN
1 cttattcaat tgtttggagc acagaggggc tgctgaaatg gagagtctca agactgatac
61 tgaaatgccg tatcctgagg taatagtaga tgtgggcaga gtgatttttg gagaagaaaa
121 caggaagaag atgaccaaca gctgtttgaa aagatctgag aattctagaa ttatccgggc
181 tatatgtgca ctgttaaatt ctggaggtgg tgtgatcaaa gcagagattg atgataaaac
241 ctatagttac caatgccatg ggctgggaca ggatttggaa acttcttttc aaaagctcct
301 tccttcaggt tcacagaaat accttgacta catgcagcag gggcacaatc tcctgatttt
361 tgtgaagtca tggagcccag atgttttcag ccttccacta aggatttgca gcttgcgctc
421 caatttgtat cggagagatg tgacttctgc tatcaacttg agtgctagca gtgccctgga
481 gcttctcaga gagaaggggt ttagagccca aagaggaaga ccaagggtga agaagttgca
541 tcctcagcag gttctcaata gatgcattca ggaagaggaa gatatgagga tattggcctc
601 agaatttttt aaaaaggaca aactcatgta taaggagaaa ctcaacttta ctgagtcaac
661 acatgttgaa tttaaaaggt tcaccaccaa aaaagtcata cctcggatta aggaaatgct
721 gcctcattat gtttctgcat ttgccaacac tcaaggggga tatgtcctca ttggggtgga
781 tgataagagc aaagaagtgg ttggatgtaa gtgggaaaaa gtgaatcctg acttactaaa
841 aaaagaaatc gaaaactgca tagaaaaatt gcctacattc cacttctgct gtgagaagcc
901 aaaggtaaat ttcactacaa aaatcctgaa tgtgtaccaa aaagatgtcc tggatggtta
961 tgtctgtgtg attcaagtgg agcccttctg ttgcgtggtg tttgcagagg ccccagattc
1021 ctggatcatg aaagacaatt ctgtcacacg gctgacagct gagcagtggg tggtcatgat
1081 gctggatact cagtcagctc cttccagttt ggtcacagac tacaactctt gcctgatttc
1141 atcagcttca tctgcacgaa aaagtcccgg atatcccata aaagtccacg aatttaagga
1201 ggctctgcaa cgacatttgt ttccagtgac acaggaagag gtacaattta aaccagaatc
1261 cctctgtaag aagctgttct cagatcataa agaactggag ggtttaatga agaccctgat
1321 acatccttgt tctcagggga ttgtgatatt ttctagaagc tgggctggtg atgttggctt
1381 caggaaagaa cagaatgtcc tgtgtgatgc tctcctgata gcagttaaca gccccgtggt
1441 actctataca atcttaatag accccaattg gcctggagga cttgaatatg cccgaaacac
1501 agctcatcag ttaaagcaga aactgcaaac tgttggtggt tacacaggga aagtgtgcat
1561 cattccaagg ctgatacacc tgagcagcac acagagtaga cctggtgaga tccccctgcg
1621 ttaccccagg tcctacaggc ttgctgatga ggaggaaatg gaagacttgc tgcaggctct
1681 ggtggtggtc tccctgtcct ccagatctct tctgagtgac cagatgggct gtgaattttt
1741 caacttgctc ataatggagc agagccagtt gctttctgag agtcttcaga agacacgtga
1801 attattcatc tactgctttc caggagtcag gaagacagcc ctagccataa agatcatgga
1861 gaaaattaag gacttgtttc actgcaaacc aaaagagatc ctctatgttt gtgaaagcga
1921 ctccctaaag gattttgtga cccaacaaac cacctgccaa gctgtgacca ggaaaacttt
1981 catgcaaggg gagtttctaa agattaaaca catagtgatg gatgagactg agaatttctg
2041 cagcaaatat ggcaattggt acatgaaggc taagaacatc acccatccaa aggcgaaggg
2101 gactggaagt gaaaaccttc accatgggat tctctggctt tttcttgacc cttttcaaat
2161 ccatcacgca gatgtcaatg gccttccccc tccatctgct cagtttcctc gaaaaacaat
2221 caccagtggg atccactgtg ctctggaaat agcgaaggtt atgaaagaag aaatgaagag
2281 gatcaaagaa aatcctccct ccaacatgtc tccagacaca ttagcattgt tcagcgagac
2341 tgcctatgag gaagcaacgt gtgcccaggc tctgcctggg gtgtgtgaga caaagactaa
2401 tctgacaaca gaacaaatag ctaactatgt ggcaagaaaa tgtcacagcc tgttccagtg
2461 tggctatctg cccaaagata tagcaattct gtgcaggaga ggggaggaca gaggacgcta
2521 taggcttgca ctactcaaag caatggaatt aattgagacc cacagaccat cagaggttgt
2581 gtttagcccg gccaccggtg tttggggaag tcacattgtt ttagacagta ttcagcaatt
2641 ttcaggcctg gagaggactg tcgtgtttgg gcttagtcca gaatgtgacc agtcagagga
2701 atttcataag ctctgctttg cttcaagagc cattaaacac ctctacctgc tttatgaaaa
2761 gagggcagcc tactgaaaat tattacaaat aatagaggaa gacaggaaga gcagagtcct
2821 ttctcctaga caggtagcag tgactccatt ttaatattac aagtgaggaa atcaaggcac
2881 atcagtatgg
//