LOCUS BC157877 2883 bp mRNA linear HUM 30-JUN-2008
DEFINITION Homo sapiens schlafen family member 14, mRNA (cDNA clone MGC:189770
IMAGE:9057094), complete cds.
ACCESSION BC157877
VERSION BC157877.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2883)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2883)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-DEC-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: B Column: 10.
FEATURES Location/Qualifiers
source 1..2883
/db_xref="H-InvDB:HIT000503432"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:189770 IMAGE:9057094"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCTGGAGC"
gene 1..2883
/gene="SLFN14"
/db_xref="GeneID:342618"
/db_xref="HGNC:HGNC:32689"
CDS 31..2769
/gene="SLFN14"
/codon_start=1
/product="schlafen family member 14"
/protein_id="AAI57878.1"
/db_xref="GeneID:342618"
/db_xref="HGNC:HGNC:32689"
/translation="MESLKTDTEMPYPEVIVDVGRVIFGEENRKKMTNSCLKRSENSR
IIRAICALLNSGGGVIKAEIDDKTYSYQCHGLGQDLETSFQKLLPSGSQKYLDYMQQG
HNLLIFVKSWSPDVFSLPLRICSLRSNLYRRDVTSAINLSASSALELLREKGFRAQRG
RPRVKKLHPQQVLNRCIQEEEDMRILASEFFKKDKLMYKEKLNFTESTHVEFKRFTTK
KVIPRIKEMLPHYVSAFANTQGGYVLIGVDDKSKEVVGCKWEKVNPDLLKKEIENCIE
KLPTFHFCCEKPKVNFTTKILNVYQKDVLDGYVCVIQVEPFCCVVFAEAPDSWIMKDN
SVTRLTAEQWVVMMLDTQSAPSSLVTDYNSCLISSASSARKSPGYPIKVHEFKEALQR
HLFPVTQEEVQFKPESLCKKLFSDHKELEGLMKTLIHPCSQGIVIFSRSWAGDVGFRK
EQNVLCDALLIAVNSPVVLYTILIDPNWPGGLEYARNTAHQLKQKLQTVGGYTGKVCI
IPRLIHLSSTQSRPGEIPLRYPRSYRLADEEEMEDLLQALVVVSLSSRSLLSDQMGCE
FFNLLIMEQSQLLSESLQKTRELFIYCFPGVRKTALAIKIMEKIKDLFHCKPKEILYV
CESDSLKDFVTQQTTCQAVTRKTFMQGEFLKIKHIVMDETENFCSKYGNWYMKAKNIT
HPKAKGTGSENLHHGILWLFLDPFQIHHADVNGLPPPSAQFPRKTITSGIHCALEIAK
VMKEEMKRIKENPPSNMSPDTLALFSETAYEEATCAQALPGVCETKTNLTTEQIANYV
ARKCHSLFQCGYLPKDIAILCRRGEDRGRYRLALLKAMELIETHRPSEVVFSPATGVW
GSHIVLDSIQQFSGLERTVVFGLSPECDQSEEFHKLCFASRAIKHLYLLYEKRAAY"
BASE COUNT 869 a 591 c 693 g 730 t
ORIGIN
1 aattgtttgg agcacagagg ggctgctgaa atggagagtc tcaagactga tactgaaatg
61 ccgtatcctg aggtaatagt agatgtgggc agagtgattt ttggagaaga aaacaggaag
121 aagatgacca acagctgttt gaaaagatct gagaattcta gaattatccg ggctatatgt
181 gcactgttaa attctggagg tggtgtgatc aaagcagaga ttgatgataa aacctatagt
241 taccaatgcc atgggctggg acaggatttg gaaacttctt ttcaaaagct ccttccttca
301 ggttcacaga aataccttga ctacatgcag caggggcaca atctcctgat ttttgtgaag
361 tcatggagcc cagatgtttt cagccttcca ctaaggattt gcagcttgcg ctccaatttg
421 tatcggagag atgtgacttc tgctatcaac ttgagtgcta gcagtgccct ggagcttctc
481 agagagaagg ggtttagagc ccaaagagga agaccaaggg tgaagaagtt gcatcctcag
541 caggttctca atagatgcat tcaggaagag gaagatatga ggatattggc ctcagaattt
601 tttaaaaagg acaaactcat gtataaggag aaactcaact ttactgagtc aacacatgtt
661 gaatttaaaa ggttcaccac caaaaaagtc atacctcgga ttaaggaaat gctgcctcat
721 tatgtttctg catttgccaa cactcaaggg ggatatgtcc tcattggggt ggatgataag
781 agcaaagaag tggttggatg taagtgggaa aaagtgaatc ctgacttact aaaaaaagaa
841 atcgaaaact gcatagaaaa attgcctaca ttccacttct gctgtgagaa gccaaaggta
901 aatttcacta caaaaatcct gaatgtgtac caaaaagatg tcctggatgg ttatgtctgt
961 gtgattcaag tggagccctt ctgttgcgtg gtgtttgcag aggccccaga ttcctggatc
1021 atgaaagaca attctgtcac acggctgaca gctgagcagt gggtggtcat gatgctggat
1081 actcagtcag ctccttccag tttggtcaca gactacaact cttgcctgat ttcatcagct
1141 tcatctgcac gaaaaagtcc cggatatccc ataaaagtcc acgaatttaa ggaggctctg
1201 caacgacatt tgtttccagt gacacaggaa gaggtacaat ttaaaccaga atccctctgt
1261 aagaagctgt tctcagatca taaagaactg gagggtttaa tgaagaccct gatacatcct
1321 tgttctcagg ggattgtgat attttctaga agctgggctg gtgatgttgg cttcaggaaa
1381 gaacagaatg tcctgtgtga tgctctcctg atagcagtta acagccccgt ggtactctat
1441 acaatcttaa tagaccccaa ttggcctgga ggacttgaat atgcccgaaa cacagctcat
1501 cagttaaagc agaaactgca aactgttggt ggttacacag ggaaagtgtg catcattcca
1561 aggctgatac acctgagcag cacacagagt agacctggtg agatccccct gcgttacccc
1621 aggtcctaca ggcttgctga tgaggaggaa atggaagact tgctgcaggc tctggtggtg
1681 gtctccctgt cctccagatc tcttctgagt gaccagatgg gctgtgaatt tttcaacttg
1741 ctcataatgg agcagagcca gttgctttct gagagtcttc agaagacacg tgaattattc
1801 atctactgct ttccaggagt caggaagaca gccctagcca taaagatcat ggagaaaatt
1861 aaggacttgt ttcactgcaa accaaaagag atcctctatg tttgtgaaag cgactcccta
1921 aaggattttg tgacccaaca aaccacctgc caagctgtga ccaggaaaac tttcatgcaa
1981 ggggagtttc taaagattaa acacatagtg atggatgaga ctgagaattt ctgcagcaaa
2041 tatggcaatt ggtacatgaa ggctaagaac atcacccatc caaaggcgaa ggggactgga
2101 agtgaaaacc ttcaccatgg gattctctgg ctttttcttg acccttttca aatccatcac
2161 gcagatgtca atggccttcc ccctccatct gctcagtttc ctcgaaaaac aatcaccagt
2221 gggatccact gtgctctgga aatagcgaag gttatgaaag aagaaatgaa gaggatcaaa
2281 gaaaatcctc cctccaacat gtctccagac acattagcat tgttcagcga gactgcctat
2341 gaggaagcaa cgtgtgccca ggctctgcct ggggtgtgtg agacaaagac taatctgaca
2401 acagaacaaa tagctaacta tgtggcaaga aaatgtcaca gcctgttcca gtgtggctat
2461 ctgcccaaag atatagcaat tctgtgcagg agaggggagg acagaggacg ctataggctt
2521 gcactactca aagcaatgga attaattgag acccacagac catcagaggt tgtgtttagc
2581 ccggccaccg gtgtttgggg aagtcacatt gttttagaca gtattcagca attttcaggc
2641 ctggagagga ctgtcgtgtt tgggcttagt ccagaatgtg accagtcaga ggaatttcat
2701 aagctctgct ttgcttcaag agccattaaa cacctctacc tgctttatga aaagagggca
2761 gcctactgaa aattattaca aataatagag gaagacagga agagcagagt cctttctcct
2821 agacaggtag cagtgactcc attttaatat tacaagtgag gaaatcaagg cacatcagta
2881 tgg
//