LOCUS BC157875 2135 bp mRNA linear HUM 10-JUN-2008
DEFINITION Homo sapiens rcRPE, mRNA (cDNA clone MGC:189769 IMAGE:9057093),
complete cds.
ACCESSION BC157875
VERSION BC157875.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2135)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2135)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-DEC-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 684 Row: p Column: 19.
FEATURES Location/Qualifiers
source 1..2135
/db_xref="H-InvDB:HIT000503430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:189769 IMAGE:9057093"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GTGTGGTC"
gene 1..2135
/gene="LOC729020"
/db_xref="GeneID:729020"
CDS 112..798
/gene="LOC729020"
/codon_start=1
/product="LOC729020 protein"
/protein_id="AAI57876.1"
/db_xref="GeneID:729020"
/translation="MASGCKIGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFV
PNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPG
TLIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKV
HWLRTQFPSLDIEGDGGVGSDTVHKCAEAGANMTVSGSAIMRSEDPRSVINLLRNICS
EAAQKRSLDR"
BASE COUNT 637 a 379 c 463 g 656 t
ORIGIN
1 ctggccaaac tgtggttctt tggtagaatt tcctggtttt aaaaaaaaaa aaaagtgggc
61 tctagtcttg ccggggactc gtggggtaac ttgttcttgg gagccagcgg tatggcgtcg
121 ggctgcaaga ttggcccgtc catcctcaac agcgacctgg ccaatttagg ggccaagtgc
181 ctccagatgc tagactctgg ggccgattat ctgcatctgg atgtaatgga tgggcatttt
241 gttcccaaca tcacctttgg tcaccctgtg gtagaaagcc ttcgaaagca gctaggccag
301 gaccctttct ttgacatgca catgatggtg tccaagccag aacagtgggt aaagccaatg
361 gctgtagcag aagccaatca gtacaccttt catctcgagg ctactgagaa cccagggact
421 ttgattaaag acattcggga gaatgggatg aaggttggcc ttgccatcaa accaggaacc
481 tcagttgagt atttggcacc atgggctaat caaatagata tggccttggt tatgacagtg
541 gaaccggggt ttggagagca gaaattcatg gaagatatga tgccaaaggt tcactggttg
601 aggacccagt tcccatcttt ggatatagag ggcgatggtg gagtaggttc tgacactgtc
661 cataagtgtg cagaggcagg agctaacatg actgtatctg gcagtgctat tatgaggagt
721 gaagacccca gatctgtgat caacctatta agaaatattt gctcagaagc tgctcagaaa
781 cgttctcttg atcgatgaaa ccataaggag cccaatgttt ctgttcatga aatctccctt
841 ttactggaaa acaggaatat tgactaccaa atcatcatga aattgaagct gtactgcttt
901 tttgagcagt tattcattcc agtgattaaa actgattgtg cagaatattc taagaggtca
961 gaaattggtg tgtataacta catttttagt gatgcaattt aatgattagt gagtaagata
1021 ctgtttttat tgagagactt gatttttata aagagtaaaa atacggctgc attaaggtta
1081 caaacagaaa agtgtcttaa tgcctaagga gggcatatta gctacactac aaaaacaaat
1141 tttgtctgta cttctgaaaa gaattttgtt gtttctcagc tgttttccaa aagcaaagga
1201 agtctttatg gcttttttct atttcatgtt atttgtgatt tgtttataag tttgggtggg
1261 atggcatacc atattcttgg ttcttaaaat ctatcacttt tcaccttaca cttaatgtgt
1321 aaaaactata aaaacaatgc gtgaaaccca ggggttctaa aatacaagca tagattttat
1381 cagggtgttt ttgtcaaagc aggttattca gtgattcctc cccaccattc ttaaggacgt
1441 taaataatgc tgttgtgtta gctctgagta gaaaggaaaa agtaaaaacc tctgtatgga
1501 agtaatattg ggttgaattc tgactgccct tttctagctg gacctttaac aaatcaccca
1561 gtcttttttg tgtttctctg aagtcattta tacattaaat gtaattataa caactgtggg
1621 gttgtgttga gaattaagag gtaacactat atatgtaaag tttctagtac tagtcccaga
1681 atttagaata tgctcaatac aaagtagata gcattatata agtttatatt tttgtgagtt
1741 ataaagtact ttgatatatt ctcattaaat ctgtaaatca cctctataag taagtggtaa
1801 taataaagca gatatttttg tccccattta aaaaaaaaaa aaaaaaagtg ttccctaaca
1861 gtttccagag cacgagctga agggattgat gggctcctca aaggctatac acttttcatg
1921 gccttgtctc ttccaggtac agtgctggct acttttacat atatgttgtc aacaaatcct
1981 caggataatt ctaaggcaat tctactgcaa atgagatact atcttaattt acagttgaca
2041 aaaactgagt ctcaggaagg ttgcctgacc tgctcaaggt catatagcta gtaagggtgc
2101 agtataggtt cgaacccacc tgcctgatta cgtct
//